RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 PHACTR1Q9C0D0 580 aa8.9□□□□□ -0.98
NIFKP3-201ENST00000417799 CFAP43Q8NDM7 1665 aa8.89□□□□□ -0.99
NIFKP3-201ENST00000417799 PHKA2P46019 1235 aa8.89□□□□□ -0.99
NIFKP3-201ENST00000417799 POU4F2Q12837 409 aa8.89□□□□□ -0.99
NIFKP3-201ENST00000417799 CRIPAKQ8N1N5 446 aa8.89□□□□□ -0.99
NIFKP3-201ENST00000417799 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
NIFKP3-201ENST00000417799 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 TXLNAP40222 546 aa8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 C1orf53Q5VUE5 145 aa8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 NBPF10Q6P3W6 841 aaKnown RBP8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 LRFN2Q9ULH4 789 aa8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 TROQ12816 1431 aaPredicted RBP8.88□□□□□ -0.99
NIFKP3-201ENST00000417799 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 MAGI3Q5TCQ9 1506 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 FIGNL2A6NMB9 653 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 FAM13AO94988 1023 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 ECM1Q16610 540 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 RTN1Q16799 776 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 RGS22Q8NE09 1264 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 STIM2Q9P246 746 aa8.87□□□□□ -0.99
NIFKP3-201ENST00000417799 EHBP1L1Q8N3D4 1523 aa8.86□□□□□ -0.99
NIFKP3-201ENST00000417799 TNFRSF10BO14763 440 aa8.86□□□□□ -0.99
NIFKP3-201ENST00000417799 NPR3P17342 541 aa8.86□□□□□ -0.99
NIFKP3-201ENST00000417799 RHOQP17081 205 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 MPSTP25325 297 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 BRD2P25440 801 aaKnown RBP8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 MARSP56192 900 aaKnown RBP8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 DGKZQ13574 1117 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 C11orf91Q3C1V1 193 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 AAASQ9NRG9 546 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 ASXL2Q76L83 1435 aa8.85□□□□□ -0.99
NIFKP3-201ENST00000417799 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 ST8SIA5O15466 376 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 ARHGAP4P98171 946 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 RHPN1Q8TCX5 695 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 TIMMDC1Q9NPL8 285 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 ATP13A2Q9NQ11 1180 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 KLK14Q9P0G3 267 aa8.84□□□□□ -0.99
NIFKP3-201ENST00000417799 NCOA2Q15596 1464 aa8.83□□□□□ -1
NIFKP3-201ENST00000417799 NOM1Q5C9Z4 860 aaKnown RBP8.83□□□□□ -1
NIFKP3-201ENST00000417799 ABTB2Q8N961 1025 aa8.83□□□□□ -1
NIFKP3-201ENST00000417799 MAPKBP1O60336 1514 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 A0A1B0GTH6 734 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 EIF1AXP47813 144 aaKnown RBP8.82□□□□□ -1
NIFKP3-201ENST00000417799 ALKBH2Q6NS38 261 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 C7orf43Q8WVR3 580 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 IFT43Q96FT9 208 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 DNMT3LQ9UJW3 386 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 PHLDB1Q86UU1 1377 aa8.82□□□□□ -1
NIFKP3-201ENST00000417799 SUPT6HQ7KZ85 1726 aaKnown RBP8.82□□□□□ -1
NIFKP3-201ENST00000417799 MAN1A2O60476 641 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 MAPK1P28482 360 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 AAMPQ13685 434 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 HIF1AQ16665 826 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
NIFKP3-201ENST00000417799 FAM26DQ5JW98 314 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 BICDL1Q6ZP65 573 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 DACH1Q9UI36 760 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 GPC6Q9Y625 555 aaPredicted RBP8.81□□□□□ -1
NIFKP3-201ENST00000417799 CCNB3Q8WWL7 1395 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 ABCC10Q5T3U5 1492 aa8.81□□□□□ -1
NIFKP3-201ENST00000417799 KIF14Q15058 1648 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 ZBTB39O15060 712 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 ATP4AP20648 1035 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 MSX1P28360 303 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 DNAJC14Q6Y2X3 702 aaPredicted RBP8.8□□□□□ -1
NIFKP3-201ENST00000417799 ETFBKMTQ8IXQ9 262 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
NIFKP3-201ENST00000417799 ERCC3P19447 782 aa8.79□□□□□ -1
NIFKP3-201ENST00000417799 ARSJQ5FYB0 599 aaPredicted RBP8.79□□□□□ -1
NIFKP3-201ENST00000417799 FOXD4L4Q8WXT5 416 aaPredicted RBP8.79□□□□□ -1
NIFKP3-201ENST00000417799 SUSD3Q96L08 255 aa8.79□□□□□ -1
NIFKP3-201ENST00000417799 NEUROD4Q9HD90 331 aa8.79□□□□□ -1
NIFKP3-201ENST00000417799 BRPF3Q9ULD4 1205 aa8.79□□□□□ -1
NIFKP3-201ENST00000417799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.79□□□□□ -1
NIFKP3-201ENST00000417799 NDUFB5O43674 189 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 TREML1Q86YW5 311 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 KLRG1Q96E93 195 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 ZIC5Q96T25 663 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 ANKIB1Q9P2G1 1089 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 CFDP1Q9UEE9 299 aaPredicted RBP8.78□□□□□ -1
NIFKP3-201ENST00000417799 BCS1LQ9Y276 419 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
NIFKP3-201ENST00000417799 GPATCH8Q9UKJ3 1502 aaKnown RBP8.78□□□□□ -1
NIFKP3-201ENST00000417799 TGFBR3LH3BV60 316 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 FZD6O60353 706 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 ZAP70P43403 619 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 ATCAYQ86WG3 371 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 ZNF280CQ8ND82 737 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 HSH2DQ96JZ2 352 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 GAS2L1Q99501 681 aaPredicted RBP8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 GPAMQ9HCL2 828 aa8.77□□□□□ -1.01
NIFKP3-201ENST00000417799 CCDC87Q9NVE4 849 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms