RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
HLA-DPA1-241ENST00000417724 RPGRQ92834 1020 aaKnown RBP10.47□□□□□ -0.73
HLA-DPA1-241ENST00000417724 ABHD8Q96I13 439 aa10.47□□□□□ -0.73
HLA-DPA1-241ENST00000417724 HOXA10P31260 410 aaPredicted RBP10.46□□□□□ -0.73
HLA-DPA1-241ENST00000417724 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
HLA-DPA1-241ENST00000417724 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
HLA-DPA1-241ENST00000417724 NGEFQ8N5V2 710 aa10.46□□□□□ -0.73
HLA-DPA1-241ENST00000417724 NUP98P52948 1817 aa10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 EPS15P42566 896 aa10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PAXIP1Q6ZW49 1069 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 USP50Q70EL3 339 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 NUTM1Q86Y26 1132 aa10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 RBM17Q96I25 401 aaKnown RBP10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CAPNS2Q96L46 248 aa10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 GPR101Q96P66 508 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CRAMP1Q96RY5 1269 aa10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-241ENST00000417724 MAP3K15Q6ZN16 1313 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 NEFMP07197 916 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 SCNN1DP51172 638 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 KIF6Q6ZMV9 814 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 NIM1KQ8IY84 436 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 RRP7AQ9Y3A4 280 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TRPM7Q96QT4 1865 aa10.44□□□□□ -0.74
HLA-DPA1-241ENST00000417724 SNED1Q8TER0 1413 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 GPTP24298 496 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 MAP2K2P36507 400 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 GRM1Q13255 1194 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CST9Q5W186 159 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 VPS33BQ9H267 617 aa10.43□□□□□ -0.74
HLA-DPA1-241ENST00000417724 RIC1Q4ADV7 1423 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ABCC12Q96J65 1359 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 IBTKQ9P2D0 1353 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CCDC85CA6NKD9 419 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TRAF5O00463 557 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TCERG1O14776 1098 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PPEF1O14829 653 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PPP2R1AP30153 589 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 FAM161AQ3B820 660 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 SUSD4Q5VX71 490 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CYP4F22Q6NT55 531 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TTLL7Q6ZT98 887 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ADARB2Q9NS39 739 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 TLL2Q9Y6L7 1015 aa10.42□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PPIP5K2O43314 1243 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CA12O43570 354 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 MYL6BP14649 208 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 EIF4A1P60842 406 aaKnown RBP10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 MLLT1Q03111 559 aaPredicted RBP10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PPP1R42Q7Z4L9 355 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 SUPT20HQ8NEM7 779 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ZBTB3Q9H5J0 574 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 GPRC5DQ9NZD1 345 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ZNRF3Q9ULT6 936 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 LAMB4A4D0S4 1761 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 LTBP1Q14766 1721 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 COL4A5P29400 1685 aa10.41□□□□□ -0.74
HLA-DPA1-241ENST00000417724 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 SLC34A2O95436 690 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 RGS19P49795 217 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 CXCL9Q07325 125 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 PARP10Q53GL7 1025 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 ATP6V0A2Q9Y487 856 aa10.4□□□□□ -0.74
HLA-DPA1-241ENST00000417724 BBOX1O75936 387 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CELF2O95319 508 aaKnown RBP10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 NTSR2O95665 410 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 AOC3Q16853 763 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 SAPCD2Q86UD0 394 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 HHIPL1Q96JK4 782 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 UTP14AQ9BVJ6 771 aaKnown RBP10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
HLA-DPA1-241ENST00000417724 ERBB4Q15303 1308 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CASP8AP2Q9UKL3 1982 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 THSD7BQ9C0I4 1608 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 AOC2O75106 756 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 GMPSP49915 693 aaPredicted RBP10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 TNIP1Q15025 636 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CIAPIN1Q6FI81 312 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 SP8Q8IXZ3 490 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 BCL2L13Q9BXK5 485 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 PNNQ9H307 717 aaKnown RBP10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 PGAP2Q9UHJ9 254 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CDHR2Q9BYE9 1310 aa10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 BRPF1P55201 1214 aaPredicted RBP10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 DPP8Q6V1X1 898 aaPredicted RBP10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 CDC37L1Q7L3B6 337 aa10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 MPNDQ8N594 471 aa10.37□□□□□ -0.75
HLA-DPA1-241ENST00000417724 GLIS2Q9BZE0 524 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms