RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 CC2D2BQ6DHV5 1058 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 PSMD1Q99460 953 aa16.65■□□□□ 0.26
SDCCAG3-205ENST00000417512 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
SDCCAG3-205ENST00000417512 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
SDCCAG3-205ENST00000417512 DICER1Q9UPY3 1922 aaKnown RBP16.64■□□□□ 0.25
SDCCAG3-205ENST00000417512 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
SDCCAG3-205ENST00000417512 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 HLFQ16534 295 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 MCM10Q7L590 875 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 NYXQ9GZU5 481 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
SDCCAG3-205ENST00000417512 SCN4AP35499 1836 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 SLC34A2O95436 690 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 EPS15P42566 896 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 MLLT1Q03111 559 aaPredicted RBP16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 LARGE2Q8N3Y3 721 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 SCN7AQ01118 1682 aa16.62■□□□□ 0.25
SDCCAG3-205ENST00000417512 CYP4F22Q6NT55 531 aa16.61■□□□□ 0.25
SDCCAG3-205ENST00000417512 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
SDCCAG3-205ENST00000417512 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
SDCCAG3-205ENST00000417512 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 NUTM1Q86Y26 1132 aa16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
SDCCAG3-205ENST00000417512 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 CRY2Q49AN0 593 aa16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 CST9Q5W186 159 aa16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
SDCCAG3-205ENST00000417512 ERVV-1B6SEH8 477 aa16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 TRAF5O00463 557 aa16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 HTATSF1O43719 755 aaKnown RBP16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 MAP2K2P36507 400 aa16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 SCNN1DP51172 638 aa16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
SDCCAG3-205ENST00000417512 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
SDCCAG3-205ENST00000417512 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
SDCCAG3-205ENST00000417512 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
SDCCAG3-205ENST00000417512 TLL2Q9Y6L7 1015 aa16.57■□□□□ 0.24
SDCCAG3-205ENST00000417512 RGS19P49795 217 aa16.56■□□□□ 0.24
SDCCAG3-205ENST00000417512 KIF6Q6ZMV9 814 aa16.56■□□□□ 0.24
SDCCAG3-205ENST00000417512 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
SDCCAG3-205ENST00000417512 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
SDCCAG3-205ENST00000417512 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
SDCCAG3-205ENST00000417512 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
SDCCAG3-205ENST00000417512 PPIP5K2O43314 1243 aa16.55■□□□□ 0.24
SDCCAG3-205ENST00000417512 AOC2O75106 756 aa16.55■□□□□ 0.24
SDCCAG3-205ENST00000417512 GPTP24298 496 aa16.55■□□□□ 0.24
SDCCAG3-205ENST00000417512 ADARB2Q9NS39 739 aaKnown RBP16.55■□□□□ 0.24
SDCCAG3-205ENST00000417512 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 CA12O43570 354 aa16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 CELF2O95319 508 aaKnown RBP16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 VPS33BQ9H267 617 aa16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SDCCAG3-205ENST00000417512 NEFMP07197 916 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 MYL6BP14649 208 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 AOC3Q16853 763 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 NLRP3Q96P20 1036 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 ZBTB3Q9H5J0 574 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 GPRC5DQ9NZD1 345 aa16.53■□□□□ 0.24
SDCCAG3-205ENST00000417512 CACNA1SQ13698 1873 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 ADAMTSL1Q8N6G6 1762 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 ARFGEF2Q9Y6D5 1785 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 TTLL7Q6ZT98 887 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 PPP1R42Q7Z4L9 355 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
SDCCAG3-205ENST00000417512 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 CXCL9Q07325 125 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 MCOLN1Q9GZU1 580 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 ZNF408Q9H9D4 720 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
SDCCAG3-205ENST00000417512 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
SDCCAG3-205ENST00000417512 GMPSP49915 693 aaPredicted RBP16.49■□□□□ 0.23
SDCCAG3-205ENST00000417512 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
SDCCAG3-205ENST00000417512 DGKZQ13574 1117 aa16.49■□□□□ 0.23
SDCCAG3-205ENST00000417512 TNIP1Q15025 636 aa16.49■□□□□ 0.23
SDCCAG3-205ENST00000417512 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
SDCCAG3-205ENST00000417512 BBOX1O75936 387 aa16.48■□□□□ 0.23
SDCCAG3-205ENST00000417512 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms