RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
HLA-DPB1-210ENST00000416804 ERVV-1B6SEH8 477 aa20.83■□□□□ 0.92
HLA-DPB1-210ENST00000416804 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.92
HLA-DPB1-210ENST00000416804 CAPNS2Q96L46 248 aa20.83■□□□□ 0.92
HLA-DPB1-210ENST00000416804 BEGAINQ9BUH8 593 aa20.83■□□□□ 0.92
HLA-DPB1-210ENST00000416804 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.92
HLA-DPB1-210ENST00000416804 RIC1Q4ADV7 1423 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 HOXA10P31260 410 aaPredicted RBP20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 SCNN1DP51172 638 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 TAF7Q15545 349 aaPredicted RBP20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 COL4A5P29400 1685 aa20.82■□□□□ 0.92
HLA-DPB1-210ENST00000416804 SLC34A2O95436 690 aa20.81■□□□□ 0.92
HLA-DPB1-210ENST00000416804 PAXIP1Q6ZW49 1069 aaPredicted RBP20.81■□□□□ 0.92
HLA-DPB1-210ENST00000416804 USP50Q70EL3 339 aaPredicted RBP20.81■□□□□ 0.92
HLA-DPB1-210ENST00000416804 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
HLA-DPB1-210ENST00000416804 MAP3K15Q6ZN16 1313 aa20.8■□□□□ 0.92
HLA-DPB1-210ENST00000416804 LTBP1Q14766 1721 aa20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 EPS15P42566 896 aa20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 KIF6Q6ZMV9 814 aa20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 GPR101Q96P66 508 aaPredicted RBP20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 CRAMP1Q96RY5 1269 aa20.79■□□□□ 0.92
HLA-DPB1-210ENST00000416804 NIM1KQ8IY84 436 aa20.78■□□□□ 0.92
HLA-DPB1-210ENST00000416804 PNISRQ8TF01 805 aaKnown RBP20.78■□□□□ 0.92
HLA-DPB1-210ENST00000416804 RBM17Q96I25 401 aaKnown RBP20.78■□□□□ 0.92
HLA-DPB1-210ENST00000416804 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
HLA-DPB1-210ENST00000416804 CYP4F22Q6NT55 531 aa20.77■□□□□ 0.92
HLA-DPB1-210ENST00000416804 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
HLA-DPB1-210ENST00000416804 TLL2Q9Y6L7 1015 aa20.77■□□□□ 0.92
HLA-DPB1-210ENST00000416804 FMR1Q06787 632 aaKnown RBP eCLIP20.76■□□□□ 0.91
HLA-DPB1-210ENST00000416804 VPS33BQ9H267 617 aa20.76■□□□□ 0.91
HLA-DPB1-210ENST00000416804 MIS18AQ9NYP9 233 aa20.76■□□□□ 0.91
HLA-DPB1-210ENST00000416804 UBN2Q6ZU65 1347 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 GPTP24298 496 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 MAP2K2P36507 400 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 GRM1Q13255 1194 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 CST9Q5W186 159 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 TTLL7Q6ZT98 887 aa20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 TMX4Q9H1E5 349 aaPredicted RBP20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ADARB2Q9NS39 739 aaKnown RBP20.75■□□□□ 0.91
HLA-DPB1-210ENST00000416804 TRAF5O00463 557 aa20.74■□□□□ 0.91
HLA-DPB1-210ENST00000416804 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
HLA-DPB1-210ENST00000416804 PPP2R1AP30153 589 aa20.74■□□□□ 0.91
HLA-DPB1-210ENST00000416804 SUSD4Q5VX71 490 aa20.74■□□□□ 0.91
HLA-DPB1-210ENST00000416804 NUP98P52948 1817 aa20.74■□□□□ 0.91
HLA-DPB1-210ENST00000416804 CCDC85CA6NKD9 419 aa20.73■□□□□ 0.91
HLA-DPB1-210ENST00000416804 MLLT1Q03111 559 aaPredicted RBP20.73■□□□□ 0.91
HLA-DPB1-210ENST00000416804 GPRC5DQ9NZD1 345 aa20.73■□□□□ 0.91
HLA-DPB1-210ENST00000416804 RRP7AQ9Y3A4 280 aaKnown RBP20.73■□□□□ 0.91
HLA-DPB1-210ENST00000416804 TRPM7Q96QT4 1865 aa20.73■□□□□ 0.91
HLA-DPB1-210ENST00000416804 CA12O43570 354 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 NTSR2O95665 410 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 NEFMP07197 916 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 RGS19P49795 217 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ZNF34Q8IZ26 560 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 MYL6BP14649 208 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 EIF4A1P60842 406 aaKnown RBP20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 PARP10Q53GL7 1025 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 PPP1R42Q7Z4L9 355 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 SUPT20HQ8NEM7 779 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 KDM3BQ7LBC6 1761 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 AOC3Q16853 763 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 SAPCD2Q86UD0 394 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 HHIPL1Q96JK4 782 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 ZNRF3Q9ULT6 936 aa20.71■□□□□ 0.91
HLA-DPB1-210ENST00000416804 CDHR2Q9BYE9 1310 aa20.7■□□□□ 0.9
HLA-DPB1-210ENST00000416804 CELF2O95319 508 aaKnown RBP20.7■□□□□ 0.9
HLA-DPB1-210ENST00000416804 SLC51AQ86UW1 340 aa20.7■□□□□ 0.9
HLA-DPB1-210ENST00000416804 AOC2O75106 756 aa20.69■□□□□ 0.9
HLA-DPB1-210ENST00000416804 CXCL9Q07325 125 aa20.69■□□□□ 0.9
HLA-DPB1-210ENST00000416804 C3orf67Q6ZVT6 689 aa20.69■□□□□ 0.9
HLA-DPB1-210ENST00000416804 RTFDC1Q9BY42 306 aaPredicted RBP20.69■□□□□ 0.9
HLA-DPB1-210ENST00000416804 BRPF1P55201 1214 aaPredicted RBP20.68■□□□□ 0.9
HLA-DPB1-210ENST00000416804 SLC10A5Q5PT55 438 aa20.68■□□□□ 0.9
HLA-DPB1-210ENST00000416804 ZC3H15Q8WU90 426 aaKnown RBP20.68■□□□□ 0.9
HLA-DPB1-210ENST00000416804 PGAP2Q9UHJ9 254 aa20.68■□□□□ 0.9
HLA-DPB1-210ENST00000416804 TSKSQ9UJT2 592 aa20.68■□□□□ 0.9
HLA-DPB1-210ENST00000416804 GMPSP49915 693 aaPredicted RBP20.67■□□□□ 0.9
HLA-DPB1-210ENST00000416804 CIAPIN1Q6FI81 312 aa20.66■□□□□ 0.9
HLA-DPB1-210ENST00000416804 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
HLA-DPB1-210ENST00000416804 GLIS2Q9BZE0 524 aaPredicted RBP20.66■□□□□ 0.9
HLA-DPB1-210ENST00000416804 ABCC4O15439 1325 aa20.66■□□□□ 0.9
HLA-DPB1-210ENST00000416804 BBOX1O75936 387 aa20.65■□□□□ 0.9
HLA-DPB1-210ENST00000416804 DPP8Q6V1X1 898 aaPredicted RBP20.65■□□□□ 0.9
HLA-DPB1-210ENST00000416804 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
HLA-DPB1-210ENST00000416804 KIAA2012Q0VF49 1180 aa20.64■□□□□ 0.89
HLA-DPB1-210ENST00000416804 TNIP1Q15025 636 aa20.64■□□□□ 0.89
HLA-DPB1-210ENST00000416804 CDC37L1Q7L3B6 337 aa20.64■□□□□ 0.89
HLA-DPB1-210ENST00000416804 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
HLA-DPB1-210ENST00000416804 MPNDQ8N594 471 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms