RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 NBPF26B4DH59 902 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 NBPF14Q5TI25 921 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 NBPF10Q6P3W6 841 aaKnown RBP11.99□□□□□ -0.49
LINC00494-201ENST00000416742 LMBR1LQ6UX01 489 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 NBPF15Q8N660 670 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 ZNF335Q9H4Z2 1342 aaPredicted RBP11.99□□□□□ -0.49
LINC00494-201ENST00000416742 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
LINC00494-201ENST00000416742 COL18A1P39060 1754 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 CPDO75976 1380 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
LINC00494-201ENST00000416742 PCDH11XQ9BZA7 1347 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 PCDH11YQ9BZA8 1340 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 BRD1O95696 1058 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 IL2RBP14784 551 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
LINC00494-201ENST00000416742 ADCK5Q3MIX3 580 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
LINC00494-201ENST00000416742 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
LINC00494-201ENST00000416742 C5P01031 1676 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 LIMCH1Q9UPQ0 1083 aa11.98□□□□□ -0.49
LINC00494-201ENST00000416742 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 HIP1O00291 1037 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 ZKSCAN1P17029 563 aaPredicted RBP11.97□□□□□ -0.49
LINC00494-201ENST00000416742 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 DNAJC2Q99543 621 aaKnown RBP11.97□□□□□ -0.49
LINC00494-201ENST00000416742 PDRG1Q9NUG6 133 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 A0A0D9SFI3 127 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 IL17RAQ96F46 866 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 TTC14Q96N46 770 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 ADAMTS7Q9UKP4 1686 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 GPT2Q8TD30 523 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
LINC00494-201ENST00000416742 RFX5P48382 616 aaPredicted RBP11.96□□□□□ -0.49
LINC00494-201ENST00000416742 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
LINC00494-201ENST00000416742 SMC3Q9UQE7 1217 aa11.96□□□□□ -0.49
LINC00494-201ENST00000416742 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.5
LINC00494-201ENST00000416742 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.5
LINC00494-201ENST00000416742 CREB3L3Q68CJ9 461 aa11.96□□□□□ -0.5
LINC00494-201ENST00000416742 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.5
LINC00494-201ENST00000416742 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.5
LINC00494-201ENST00000416742 NSFL1CQ9UNZ2 370 aaKnown RBP11.96□□□□□ -0.5
LINC00494-201ENST00000416742 CWC25Q9NXE8 425 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-201ENST00000416742 LMTK3Q96Q04 1460 aa11.95□□□□□ -0.5
LINC00494-201ENST00000416742 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-201ENST00000416742 LARGE1O95461 756 aa11.95□□□□□ -0.5
LINC00494-201ENST00000416742 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
LINC00494-201ENST00000416742 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
LINC00494-201ENST00000416742 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
LINC00494-201ENST00000416742 CARD10Q9BWT7 1032 aa11.95□□□□□ -0.5
LINC00494-201ENST00000416742 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.95□□□□□ -0.5
LINC00494-201ENST00000416742 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 NASPP49321 788 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
LINC00494-201ENST00000416742 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
LINC00494-201ENST00000416742 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
LINC00494-201ENST00000416742 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
LINC00494-201ENST00000416742 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
LINC00494-201ENST00000416742 H7C1W4 665 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 SLC27A2O14975 620 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 CHGBP05060 677 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 ATP5JP18859 108 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 CASP7P55210 303 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 TIMM10P62072 90 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
LINC00494-201ENST00000416742 CCDC85AQ96PX6 553 aaPredicted RBP11.93□□□□□ -0.5
LINC00494-201ENST00000416742 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 FOXO4P98177 505 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 TMEM63CQ9P1W3 806 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 RNF20Q5VTR2 975 aa11.93□□□□□ -0.5
LINC00494-201ENST00000416742 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
LINC00494-201ENST00000416742 SYCE3A1L190 88 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 SYT1P21579 422 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
LINC00494-201ENST00000416742 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 MRC1P22897 1456 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 COL5A2P05997 1499 aaPredicted RBP11.92□□□□□ -0.5
LINC00494-201ENST00000416742 PSMA5P28066 241 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 GJB2P29033 226 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
LINC00494-201ENST00000416742 ZNF445P59923 1031 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 TAF6LQ9Y6J9 622 aa11.92□□□□□ -0.5
LINC00494-201ENST00000416742 STX6O43752 255 aa11.91□□□□□ -0.5
LINC00494-201ENST00000416742 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms