RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TAOK3Q9H2K8 898 aa19.77■□□□□ 0.76
UBXN4-203ENST00000416538 COL4A1P02462 1669 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 GLTPD2A6NH11 291 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 ZNF853P0CG23 659 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 XAGE3Q8WTP9 111 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 MBIPQ9NS73 344 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 CHPF2Q9P2E5 772 aa19.75■□□□□ 0.75
UBXN4-203ENST00000416538 POTECB2RU33 542 aa19.74■□□□□ 0.75
UBXN4-203ENST00000416538 COPS6Q7L5N1 327 aa19.74■□□□□ 0.75
UBXN4-203ENST00000416538 RBM46Q8TBY0 533 aaKnown RBP19.74■□□□□ 0.75
UBXN4-203ENST00000416538 GTF2E1P29083 439 aaPredicted RBP19.73■□□□□ 0.75
UBXN4-203ENST00000416538 CCDC93Q567U6 631 aa19.73■□□□□ 0.75
UBXN4-203ENST00000416538 CFAP44Q96MT7 982 aa19.73■□□□□ 0.75
UBXN4-203ENST00000416538 DDX21Q9NR30 783 aaKnown RBP eCLIP19.73■□□□□ 0.75
UBXN4-203ENST00000416538 SCN4AP35499 1836 aa19.72■□□□□ 0.75
UBXN4-203ENST00000416538 LRRC37AA6NMS7 1700 aa19.72■□□□□ 0.75
UBXN4-203ENST00000416538 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
UBXN4-203ENST00000416538 SOGA3Q5TF21 947 aa19.71■□□□□ 0.75
UBXN4-203ENST00000416538 HDGFL1Q5TGJ6 251 aa19.71■□□□□ 0.75
UBXN4-203ENST00000416538 HOXB7P09629 217 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 HOXA10P31260 410 aaPredicted RBP19.7■□□□□ 0.74
UBXN4-203ENST00000416538 PARP10Q53GL7 1025 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 ZNF277Q9NRM2 450 aaPredicted RBP19.7■□□□□ 0.74
UBXN4-203ENST00000416538 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
UBXN4-203ENST00000416538 LTBP1Q14766 1721 aa19.69■□□□□ 0.74
UBXN4-203ENST00000416538 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
UBXN4-203ENST00000416538 FKBP4Q02790 459 aaKnown RBP eCLIP19.69■□□□□ 0.74
UBXN4-203ENST00000416538 NLRP10Q86W26 655 aa19.69■□□□□ 0.74
UBXN4-203ENST00000416538 ZNF541Q9H0D2 1346 aa19.69■□□□□ 0.74
UBXN4-203ENST00000416538 HTRA3P83110 453 aa19.68■□□□□ 0.74
UBXN4-203ENST00000416538 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
UBXN4-203ENST00000416538 IFT57Q9NWB7 429 aa19.68■□□□□ 0.74
UBXN4-203ENST00000416538 DUOX1Q9NRD9 1551 aa19.68■□□□□ 0.74
UBXN4-203ENST00000416538 DDNO94850 711 aaPredicted RBP19.67■□□□□ 0.74
UBXN4-203ENST00000416538 PPP1R42Q7Z4L9 355 aa19.67■□□□□ 0.74
UBXN4-203ENST00000416538 RPGRQ92834 1020 aaKnown RBP19.67■□□□□ 0.74
UBXN4-203ENST00000416538 UTP14AQ9BVJ6 771 aaKnown RBP19.67■□□□□ 0.74
UBXN4-203ENST00000416538 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
UBXN4-203ENST00000416538 ALDH1B1P30837 517 aa19.66■□□□□ 0.74
UBXN4-203ENST00000416538 FSTL1Q12841 308 aa19.66■□□□□ 0.74
UBXN4-203ENST00000416538 TCIRG1Q13488 830 aa19.66■□□□□ 0.74
UBXN4-203ENST00000416538 SLC10A5Q5PT55 438 aa19.66■□□□□ 0.74
UBXN4-203ENST00000416538 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
UBXN4-203ENST00000416538 APLP1P51693 650 aa19.65■□□□□ 0.74
UBXN4-203ENST00000416538 C8orf58Q8NAV2 365 aa19.65■□□□□ 0.74
UBXN4-203ENST00000416538 CRAMP1Q96RY5 1269 aa19.65■□□□□ 0.74
UBXN4-203ENST00000416538 ABCC4O15439 1325 aa19.65■□□□□ 0.74
UBXN4-203ENST00000416538 ELL2O00472 640 aaPredicted RBP19.64■□□□□ 0.73
UBXN4-203ENST00000416538 POTEIP0CG38 1075 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 POTEJP0CG39 1038 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
UBXN4-203ENST00000416538 HSP90AB3PQ58FF7 597 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 RTKN2Q8IZC4 609 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 DBF4Q9UBU7 674 aaPredicted RBP19.64■□□□□ 0.73
UBXN4-203ENST00000416538 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
UBXN4-203ENST00000416538 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
UBXN4-203ENST00000416538 IARSP41252 1262 aaKnown RBP19.63■□□□□ 0.73
UBXN4-203ENST00000416538 GNAI1P63096 354 aa19.63■□□□□ 0.73
UBXN4-203ENST00000416538 DNAJC5GQ8N7S2 189 aa19.63■□□□□ 0.73
UBXN4-203ENST00000416538 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
UBXN4-203ENST00000416538 PSMD1Q99460 953 aa19.63■□□□□ 0.73
UBXN4-203ENST00000416538 ISCA1Q9BUE6 129 aa19.63■□□□□ 0.73
UBXN4-203ENST00000416538 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
UBXN4-203ENST00000416538 DPY19L2Q6NUT2 758 aa19.62■□□□□ 0.73
UBXN4-203ENST00000416538 TSPYL6Q8N831 410 aa19.62■□□□□ 0.73
UBXN4-203ENST00000416538 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
UBXN4-203ENST00000416538 RBM17Q96I25 401 aaKnown RBP19.62■□□□□ 0.73
UBXN4-203ENST00000416538 PHAXQ9H814 394 aaKnown RBP19.62■□□□□ 0.73
UBXN4-203ENST00000416538 MYH3P11055 1940 aa19.61■□□□□ 0.73
UBXN4-203ENST00000416538 SH3TC1Q8TE82 1336 aa19.61■□□□□ 0.73
UBXN4-203ENST00000416538 ATP5J2-PTCD1G3V325 749 aa19.61■□□□□ 0.73
UBXN4-203ENST00000416538 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
UBXN4-203ENST00000416538 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
UBXN4-203ENST00000416538 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
UBXN4-203ENST00000416538 TRMT112Q9UI30 125 aaKnown RBP19.61■□□□□ 0.73
UBXN4-203ENST00000416538 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
UBXN4-203ENST00000416538 FZD9O00144 591 aa19.6■□□□□ 0.73
UBXN4-203ENST00000416538 MRS2Q9HD23 443 aa19.6■□□□□ 0.73
UBXN4-203ENST00000416538 HYPKQ9NX55 129 aa19.6■□□□□ 0.73
UBXN4-203ENST00000416538 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
UBXN4-203ENST00000416538 CALD1Q05682 793 aaKnown RBP19.59■□□□□ 0.73
UBXN4-203ENST00000416538 CC2D2BQ6DHV5 1058 aa19.59■□□□□ 0.73
UBXN4-203ENST00000416538 WWC1Q8IX03 1113 aa19.59■□□□□ 0.73
UBXN4-203ENST00000416538 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
UBXN4-203ENST00000416538 FAM89AQ96GI7 184 aa19.57■□□□□ 0.72
UBXN4-203ENST00000416538 ATP6V0A2Q9Y487 856 aa19.57■□□□□ 0.72
UBXN4-203ENST00000416538 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
UBXN4-203ENST00000416538 TAF1DQ9H5J8 278 aaPredicted RBP19.56■□□□□ 0.72
UBXN4-203ENST00000416538 ANP32CO43423 234 aa19.54■□□□□ 0.72
UBXN4-203ENST00000416538 TRIM28Q13263 835 aaKnown RBP19.54■□□□□ 0.72
UBXN4-203ENST00000416538 GRAPQ13588 217 aa19.54■□□□□ 0.72
UBXN4-203ENST00000416538 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
UBXN4-203ENST00000416538 SCN9AQ15858 1988 aa19.53■□□□□ 0.72
UBXN4-203ENST00000416538 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
UBXN4-203ENST00000416538 AOC3Q16853 763 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms