RNA–Protein interactions for RNA: ENST00000416516.2

DCLK3-201, Transcript of doublecortin like kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DCLK3, Length 5,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK3-201ENST00000416516 PRPF40BQ6NWY9 871 aaKnown RBP12.52□□□□□ -0.41
DCLK3-201ENST00000416516 CTNNBL1Q8WYA6 563 aaPredicted RBP12.52□□□□□ -0.41
DCLK3-201ENST00000416516 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
DCLK3-201ENST00000416516 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.41
DCLK3-201ENST00000416516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.41
DCLK3-201ENST00000416516 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
DCLK3-201ENST00000416516 SPAG1Q07617 926 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
DCLK3-201ENST00000416516 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 FMNL3Q8IVF7 1028 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 NUP88Q99567 741 aaPredicted RBP12.51□□□□□ -0.41
DCLK3-201ENST00000416516 ECHDC1Q9NTX5 307 aa12.51□□□□□ -0.41
DCLK3-201ENST00000416516 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
DCLK3-201ENST00000416516 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
DCLK3-201ENST00000416516 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
DCLK3-201ENST00000416516 SPATA24Q86W54 205 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 TBC1D5Q92609 795 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
DCLK3-201ENST00000416516 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC113Q9H0I3 377 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 ZSCAN23Q3MJ62 389 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC152Q4G0S7 254 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 KRT23Q9C075 422 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 DISP3Q9P2K9 1392 aa12.5□□□□□ -0.41
DCLK3-201ENST00000416516 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
DCLK3-201ENST00000416516 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
DCLK3-201ENST00000416516 CAMK4Q16566 473 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 MFSD6Q6ZSS7 791 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 FERMT3Q86UX7 667 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 ZSCAN16Q9H4T2 348 aaPredicted RBP12.49□□□□□ -0.41
DCLK3-201ENST00000416516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.41
DCLK3-201ENST00000416516 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
DCLK3-201ENST00000416516 LDHAL6AQ6ZMR3 332 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 CAMSAP2Q08AD1 1489 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 PRC1O43663 620 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 STX1AQ16623 288 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
DCLK3-201ENST00000416516 TUBB4AP04350 444 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 RFC4P35249 363 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
DCLK3-201ENST00000416516 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 ZHX1Q9UKY1 873 aaPredicted RBP12.48□□□□□ -0.41
DCLK3-201ENST00000416516 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 TCERG1LQ5VWI1 586 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 PIK3R4Q99570 1358 aa12.48□□□□□ -0.41
DCLK3-201ENST00000416516 MACROD2A1Z1Q3 448 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 KRT13P13646 458 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 MPRIPQ6WCQ1 1025 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 IMPG2Q9BZV3 1241 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 IDEP14735 1019 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 PLCG2P16885 1265 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 TUBB4BP68371 445 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC77Q9BR77 488 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
DCLK3-201ENST00000416516 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
DCLK3-201ENST00000416516 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
DCLK3-201ENST00000416516 CKAP4Q07065 602 aaKnown RBP12.47□□□□□ -0.41
DCLK3-201ENST00000416516 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 ZNF710Q8N1W2 664 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 PRIMPOLQ96LW4 560 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
DCLK3-201ENST00000416516 ADCY5O95622 1261 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
DCLK3-201ENST00000416516 TMCO5BA8MYB1 307 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 URI1O94763 535 aaPredicted RBP12.46□□□□□ -0.41
DCLK3-201ENST00000416516 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.41
DCLK3-201ENST00000416516 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
DCLK3-201ENST00000416516 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
DCLK3-201ENST00000416516 ATP2A1O14983 1001 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 RAPGEF3O95398 923 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 LRSAM1Q6UWE0 723 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 STMN4Q9H169 189 aaPredicted RBP12.46□□□□□ -0.41
DCLK3-201ENST00000416516 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 IL16Q14005 1332 aa12.46□□□□□ -0.41
DCLK3-201ENST00000416516 SEC24BO95487 1268 aa12.46□□□□□ -0.42
DCLK3-201ENST00000416516 UVSSAQ2YD98 709 aa12.46□□□□□ -0.42
DCLK3-201ENST00000416516 SNX21Q969T3 373 aa12.46□□□□□ -0.42
DCLK3-201ENST00000416516 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms