RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 SCNN1DP51172 638 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 TRIM26Q12899 539 aaPredicted RBP12.58□□□□□ -0.4
LINC01238-201ENST00000416204 CLEC4GQ6UXB4 293 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 LARGE2Q8N3Y3 721 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.4
LINC01238-201ENST00000416204 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
LINC01238-201ENST00000416204 SNRPA1P09661 255 aaKnown RBP12.57□□□□□ -0.4
LINC01238-201ENST00000416204 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
LINC01238-201ENST00000416204 GPTP24298 496 aa12.56□□□□□ -0.4
LINC01238-201ENST00000416204 ECE1P42892 770 aa12.56□□□□□ -0.4
LINC01238-201ENST00000416204 MCOLN1Q9GZU1 580 aa12.56□□□□□ -0.4
LINC01238-201ENST00000416204 ZNF408Q9H9D4 720 aa12.56□□□□□ -0.4
LINC01238-201ENST00000416204 SNED1Q8TER0 1413 aa12.55□□□□□ -0.4
LINC01238-201ENST00000416204 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
LINC01238-201ENST00000416204 C3orf67Q6ZVT6 689 aa12.55□□□□□ -0.4
LINC01238-201ENST00000416204 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
LINC01238-201ENST00000416204 PSMD1Q99460 953 aa12.55□□□□□ -0.4
LINC01238-201ENST00000416204 GLIS2Q9BZE0 524 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-201ENST00000416204 TLL2Q9Y6L7 1015 aa12.55□□□□□ -0.4
LINC01238-201ENST00000416204 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
LINC01238-201ENST00000416204 AOC3Q16853 763 aa12.54□□□□□ -0.4
LINC01238-201ENST00000416204 DLK2Q6UY11 383 aa12.54□□□□□ -0.4
LINC01238-201ENST00000416204 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
LINC01238-201ENST00000416204 THSD7BQ9C0I4 1608 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 PPEF1O14829 653 aaPredicted RBP12.53□□□□□ -0.4
LINC01238-201ENST00000416204 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 RGS19P49795 217 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 DGKZQ13574 1117 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
LINC01238-201ENST00000416204 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
LINC01238-201ENST00000416204 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
LINC01238-201ENST00000416204 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
LINC01238-201ENST00000416204 MYL6BP14649 208 aa12.52□□□□□ -0.41
LINC01238-201ENST00000416204 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
LINC01238-201ENST00000416204 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.41
LINC01238-201ENST00000416204 SAPCD2Q86UD0 394 aa12.52□□□□□ -0.41
LINC01238-201ENST00000416204 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
LINC01238-201ENST00000416204 GMPSP49915 693 aaPredicted RBP12.51□□□□□ -0.41
LINC01238-201ENST00000416204 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
LINC01238-201ENST00000416204 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
LINC01238-201ENST00000416204 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
LINC01238-201ENST00000416204 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
LINC01238-201ENST00000416204 RAD17O75943 681 aa12.5□□□□□ -0.41
LINC01238-201ENST00000416204 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
LINC01238-201ENST00000416204 MAP2K2P36507 400 aa12.5□□□□□ -0.41
LINC01238-201ENST00000416204 SOX10P56693 466 aa12.5□□□□□ -0.41
LINC01238-201ENST00000416204 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC01238-201ENST00000416204 CXCL9Q07325 125 aa12.5□□□□□ -0.41
LINC01238-201ENST00000416204 TRPM4Q8TD43 1214 aa12.5□□□□□ -0.41
LINC01238-201ENST00000416204 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
LINC01238-201ENST00000416204 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
LINC01238-201ENST00000416204 CASP8AP2Q9UKL3 1982 aa12.49□□□□□ -0.41
LINC01238-201ENST00000416204 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
LINC01238-201ENST00000416204 MAP3K15Q6ZN16 1313 aa12.49□□□□□ -0.41
LINC01238-201ENST00000416204 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-201ENST00000416204 HIRAP54198 1017 aaPredicted RBP12.49□□□□□ -0.41
LINC01238-201ENST00000416204 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
LINC01238-201ENST00000416204 KIF6Q6ZMV9 814 aa12.49□□□□□ -0.41
LINC01238-201ENST00000416204 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
LINC01238-201ENST00000416204 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
LINC01238-201ENST00000416204 NTSR2O95665 410 aa12.47□□□□□ -0.41
LINC01238-201ENST00000416204 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
LINC01238-201ENST00000416204 TAF7Q15545 349 aaPredicted RBP12.47□□□□□ -0.41
LINC01238-201ENST00000416204 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
LINC01238-201ENST00000416204 CFAP53Q96M91 514 aa12.47□□□□□ -0.41
LINC01238-201ENST00000416204 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
LINC01238-201ENST00000416204 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
LINC01238-201ENST00000416204 ABCC4O15439 1325 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 HUNKP57058 714 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
LINC01238-201ENST00000416204 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
LINC01238-201ENST00000416204 RGL2O15211 777 aa12.45□□□□□ -0.42
LINC01238-201ENST00000416204 CA12O43570 354 aa12.45□□□□□ -0.42
LINC01238-201ENST00000416204 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-201ENST00000416204 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-201ENST00000416204 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-201ENST00000416204 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
LINC01238-201ENST00000416204 ANXA1P04083 346 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
LINC01238-201ENST00000416204 SAMD7Q7Z3H4 446 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 ZNF34Q8IZ26 560 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
LINC01238-201ENST00000416204 NUDCQ9Y266 331 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 NUP98P52948 1817 aa12.44□□□□□ -0.42
LINC01238-201ENST00000416204 YDJCA8MPS7 323 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 ADM5C9JUS6 153 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 EGFRP00533 1210 aa12.43□□□□□ -0.42
LINC01238-201ENST00000416204 EIF4A1P60842 406 aaKnown RBP12.43□□□□□ -0.42
LINC01238-201ENST00000416204 TBC1D10BQ4KMP7 808 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms