RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 PPP2R1AP30153 589 aa17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 NUP98P52948 1817 aa17.54■□□□□ 0.4
CTHRC1-202ENST00000415886 KDM3BQ7LBC6 1761 aa17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 SCNN1DP51172 638 aa17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 TTLL7Q6ZT98 887 aa17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
CTHRC1-202ENST00000415886 MAP3K15Q6ZN16 1313 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 ERVV-1B6SEH8 477 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 GPTP24298 496 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 LMOD1P29536 600 aaPredicted RBP17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 EPS15P42566 896 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 MAP2K1Q02750 393 aaPredicted RBP17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
CTHRC1-202ENST00000415886 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 LARGE2Q8N3Y3 721 aa17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 RRP7AQ9Y3A4 280 aaKnown RBP17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 IBTKQ9P2D0 1353 aaPredicted RBP17.51■□□□□ 0.39
CTHRC1-202ENST00000415886 PPEF1O14829 653 aaPredicted RBP17.5■□□□□ 0.39
CTHRC1-202ENST00000415886 MYL6BP14649 208 aa17.5■□□□□ 0.39
CTHRC1-202ENST00000415886 SUSD4Q5VX71 490 aa17.5■□□□□ 0.39
CTHRC1-202ENST00000415886 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
CTHRC1-202ENST00000415886 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 TRAF5O00463 557 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 GRM1Q13255 1194 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 CYP4F22Q6NT55 531 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 CAPNS2Q96L46 248 aa17.49■□□□□ 0.39
CTHRC1-202ENST00000415886 NTSR2O95665 410 aa17.48■□□□□ 0.39
CTHRC1-202ENST00000415886 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
CTHRC1-202ENST00000415886 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
CTHRC1-202ENST00000415886 RBM17Q96I25 401 aaKnown RBP17.48■□□□□ 0.39
CTHRC1-202ENST00000415886 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
CTHRC1-202ENST00000415886 NEFMP07197 916 aa17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 CST9Q5W186 159 aa17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 ZNF34Q8IZ26 560 aa17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 PNISRQ8TF01 805 aaKnown RBP17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
CTHRC1-202ENST00000415886 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.39
CTHRC1-202ENST00000415886 PPIP5K2O43314 1243 aa17.46■□□□□ 0.39
CTHRC1-202ENST00000415886 ECE1P42892 770 aa17.46■□□□□ 0.39
CTHRC1-202ENST00000415886 AOC3Q16853 763 aa17.46■□□□□ 0.39
CTHRC1-202ENST00000415886 GPR101Q96P66 508 aaPredicted RBP17.46■□□□□ 0.39
CTHRC1-202ENST00000415886 GIGYF2Q6Y7W6 1299 aaKnown RBP17.45■□□□□ 0.38
CTHRC1-202ENST00000415886 TLL2Q9Y6L7 1015 aa17.45■□□□□ 0.38
CTHRC1-202ENST00000415886 BEGAINQ9BUH8 593 aa17.44■□□□□ 0.38
CTHRC1-202ENST00000415886 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
CTHRC1-202ENST00000415886 TSKSQ9UJT2 592 aa17.44■□□□□ 0.38
CTHRC1-202ENST00000415886 AOC2O75106 756 aa17.43■□□□□ 0.38
CTHRC1-202ENST00000415886 RALBP1Q15311 655 aa17.43■□□□□ 0.38
CTHRC1-202ENST00000415886 PPP1R42Q7Z4L9 355 aa17.43■□□□□ 0.38
CTHRC1-202ENST00000415886 ADARB2Q9NS39 739 aaKnown RBP17.43■□□□□ 0.38
CTHRC1-202ENST00000415886 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
CTHRC1-202ENST00000415886 PARP10Q53GL7 1025 aa17.42■□□□□ 0.38
CTHRC1-202ENST00000415886 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
CTHRC1-202ENST00000415886 PLEKHF1Q96S99 279 aa17.42■□□□□ 0.38
CTHRC1-202ENST00000415886 ABCC4O15439 1325 aa17.42■□□□□ 0.38
CTHRC1-202ENST00000415886 CCDC85CA6NKD9 419 aa17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 CELF2O95319 508 aaKnown RBP17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 CXCL9Q07325 125 aa17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 GLIS2Q9BZE0 524 aaPredicted RBP17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 TMX4Q9H1E5 349 aaPredicted RBP17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
CTHRC1-202ENST00000415886 GMPSP49915 693 aaPredicted RBP17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 SAPCD2Q86UD0 394 aa17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 VPS33BQ9H267 617 aa17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 LAMB2P55268 1798 aa17.4■□□□□ 0.38
CTHRC1-202ENST00000415886 ANXA1P04083 346 aa17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 MAP2K2P36507 400 aa17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 PDIA6Q15084 440 aa17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 SLC10A5Q5PT55 438 aa17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 RTFDC1Q9BY42 306 aaPredicted RBP17.39■□□□□ 0.37
CTHRC1-202ENST00000415886 SLC34A2O95436 690 aa17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 EIF2S2P20042 333 aaKnown RBP17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 PROSER3Q2NL68 480 aa17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 CIAPIN1Q6FI81 312 aa17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 ZNF408Q9H9D4 720 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms