RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ATP5J2-PTCD1G3V325 749 aa18.28■□□□□ 0.52
SGCE-202ENST00000415788 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
SGCE-202ENST00000415788 PPP1R42Q7Z4L9 355 aa18.28■□□□□ 0.52
SGCE-202ENST00000415788 NLRP10Q86W26 655 aa18.28■□□□□ 0.52
SGCE-202ENST00000415788 CWC25Q9NXE8 425 aaPredicted RBP18.28■□□□□ 0.52
SGCE-202ENST00000415788 UBN2Q6ZU65 1347 aa18.28■□□□□ 0.52
SGCE-202ENST00000415788 NEURL1BA8MQ27 555 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 IGKV5-2P06315 115 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 MMP10P09238 476 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
SGCE-202ENST00000415788 CLUAP1Q96AJ1 413 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 NYXQ9GZU5 481 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 PARP3Q9Y6F1 533 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 NUP98P52948 1817 aa18.27■□□□□ 0.52
SGCE-202ENST00000415788 PLIN1O60240 522 aa18.26■□□□□ 0.51
SGCE-202ENST00000415788 POLD1P28340 1107 aa18.26■□□□□ 0.51
SGCE-202ENST00000415788 NBR1Q14596 966 aa18.26■□□□□ 0.51
SGCE-202ENST00000415788 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
SGCE-202ENST00000415788 CWF19L2Q2TBE0 894 aaKnown RBP18.26■□□□□ 0.51
SGCE-202ENST00000415788 ANKRD36CQ5JPF3 1778 aa18.25■□□□□ 0.51
SGCE-202ENST00000415788 DDR1Q08345 913 aa18.25■□□□□ 0.51
SGCE-202ENST00000415788 TPTE2Q6XPS3 522 aa18.25■□□□□ 0.51
SGCE-202ENST00000415788 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
SGCE-202ENST00000415788 SPON1Q9HCB6 807 aa18.25■□□□□ 0.51
SGCE-202ENST00000415788 SERPINB2P05120 415 aa18.24■□□□□ 0.51
SGCE-202ENST00000415788 GCKRQ14397 625 aa18.24■□□□□ 0.51
SGCE-202ENST00000415788 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
SGCE-202ENST00000415788 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
SGCE-202ENST00000415788 TNNQ9UQP3 1299 aa18.24■□□□□ 0.51
SGCE-202ENST00000415788 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
SGCE-202ENST00000415788 RLBP1P12271 317 aa18.23■□□□□ 0.51
SGCE-202ENST00000415788 TMEM57Q8N5G2 664 aa18.23■□□□□ 0.51
SGCE-202ENST00000415788 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
SGCE-202ENST00000415788 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
SGCE-202ENST00000415788 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
SGCE-202ENST00000415788 COL24A1Q17RW2 1714 aa18.23■□□□□ 0.51
SGCE-202ENST00000415788 NPHP1O15259 732 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 NTSR2O95665 410 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
SGCE-202ENST00000415788 HSP90B1P14625 803 aaKnown RBP18.22■□□□□ 0.51
SGCE-202ENST00000415788 GTF2E1P29083 439 aaPredicted RBP18.22■□□□□ 0.51
SGCE-202ENST00000415788 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
SGCE-202ENST00000415788 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
SGCE-202ENST00000415788 GRM8O00222 908 aa18.21■□□□□ 0.51
SGCE-202ENST00000415788 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
SGCE-202ENST00000415788 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 PTGER2P43116 358 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 ST5P78524 1137 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
SGCE-202ENST00000415788 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
SGCE-202ENST00000415788 UTYO14607 1347 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 H7C1W4 665 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 PRR5LQ6MZQ0 368 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 DDX19BQ9UMR2 479 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 HDAC5Q9UQL6 1122 aa18.2■□□□□ 0.5
SGCE-202ENST00000415788 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
SGCE-202ENST00000415788 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
SGCE-202ENST00000415788 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
SGCE-202ENST00000415788 USP44Q9H0E7 712 aa18.19■□□□□ 0.5
SGCE-202ENST00000415788 RIC1Q4ADV7 1423 aa18.19■□□□□ 0.5
SGCE-202ENST00000415788 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 COG6Q9Y2V7 657 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 NRXN2Q9P2S2 1712 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 GNAI3P08754 354 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 SLC10A5Q5PT55 438 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 NUTM1Q86Y26 1132 aa18.18■□□□□ 0.5
SGCE-202ENST00000415788 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
SGCE-202ENST00000415788 AFDNP55196 1824 aaKnown RBP18.17■□□□□ 0.5
SGCE-202ENST00000415788 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
SGCE-202ENST00000415788 UBTFL1P0CB47 393 aaPredicted RBP18.16■□□□□ 0.5
SGCE-202ENST00000415788 CASP7P55210 303 aa18.16■□□□□ 0.5
SGCE-202ENST00000415788 BRIP1Q9BX63 1249 aa18.16■□□□□ 0.5
SGCE-202ENST00000415788 ZBTB7BO15156 539 aaPredicted RBP18.16■□□□□ 0.5
SGCE-202ENST00000415788 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
SGCE-202ENST00000415788 MEIS3Q99687 375 aa18.16■□□□□ 0.5
SGCE-202ENST00000415788 ABCC12Q96J65 1359 aa18.15■□□□□ 0.5
SGCE-202ENST00000415788 C10orf71Q711Q0 1435 aa18.15■□□□□ 0.5
SGCE-202ENST00000415788 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
SGCE-202ENST00000415788 PDE8AO60658 829 aa18.14■□□□□ 0.49
SGCE-202ENST00000415788 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
SGCE-202ENST00000415788 PDE6BP35913 854 aa18.14■□□□□ 0.49
SGCE-202ENST00000415788 SYNE4Q8N205 404 aa18.14■□□□□ 0.49
SGCE-202ENST00000415788 NLRP3Q96P20 1036 aa18.14■□□□□ 0.49
SGCE-202ENST00000415788 HCLS1P14317 486 aaPredicted RBP18.13■□□□□ 0.49
SGCE-202ENST00000415788 JARID2Q92833 1246 aaPredicted RBP18.13■□□□□ 0.49
SGCE-202ENST00000415788 CD2APQ9Y5K6 639 aa18.13■□□□□ 0.49
SGCE-202ENST00000415788 KLRG2A4D1S0 409 aaPredicted RBP18.12■□□□□ 0.49
SGCE-202ENST00000415788 GNAI2P04899 355 aa18.12■□□□□ 0.49
SGCE-202ENST00000415788 AAMPQ13685 434 aa18.12■□□□□ 0.49
SGCE-202ENST00000415788 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
SGCE-202ENST00000415788 SUCLG2Q96I99 432 aa18.11■□□□□ 0.49
SGCE-202ENST00000415788 CRBNQ96SW2 442 aa18.11■□□□□ 0.49
SGCE-202ENST00000415788 PPP1R1BQ9UD71 204 aaPredicted RBP18.11■□□□□ 0.49
SGCE-202ENST00000415788 CTSWP56202 376 aa18.1■□□□□ 0.49
SGCE-202ENST00000415788 TGFB2P61812 414 aa18.1■□□□□ 0.49
SGCE-202ENST00000415788 SF3B3Q15393 1217 aaKnown RBP18.1■□□□□ 0.49
SGCE-202ENST00000415788 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms