RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 CBX8Q9HC52 389 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 SFPQP23246 707 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 DNAJC25Q9H1X3 360 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 BABAM1Q9NWV8 329 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 SLU7O95391 586 aaKnown RBP13.59□□□□□ -0.23
SCN4B-202ENST00000415030 SF3B2Q13435 895 aaKnown RBP13.59□□□□□ -0.23
SCN4B-202ENST00000415030 SSH3Q8TE77 659 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 UBXN4Q92575 508 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 TIGD1Q96MW7 591 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 G3V3G9 751 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
SCN4B-202ENST00000415030 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 ERO1AQ96HE7 468 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 PRDM4Q9UKN5 801 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 CHD1O14646 1710 aa13.59□□□□□ -0.23
SCN4B-202ENST00000415030 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
SCN4B-202ENST00000415030 ELP1O95163 1332 aa13.58□□□□□ -0.23
SCN4B-202ENST00000415030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.58□□□□□ -0.23
SCN4B-202ENST00000415030 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.23
SCN4B-202ENST00000415030 ERCC6L2Q5T890 1561 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 CCDC150Q8NCX0 1101 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
SCN4B-202ENST00000415030 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 SNW1Q13573 536 aaKnown RBP13.58□□□□□ -0.24
SCN4B-202ENST00000415030 STK38Q15208 465 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
SCN4B-202ENST00000415030 CBFA2T2O43439 604 aa13.57□□□□□ -0.24
SCN4B-202ENST00000415030 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
SCN4B-202ENST00000415030 LSG1Q9H089 658 aaKnown RBP13.57□□□□□ -0.24
SCN4B-202ENST00000415030 ACEP12821 1306 aa13.57□□□□□ -0.24
SCN4B-202ENST00000415030 TOM1O60784 492 aa13.57□□□□□ -0.24
SCN4B-202ENST00000415030 FOSBP53539 338 aa13.57□□□□□ -0.24
SCN4B-202ENST00000415030 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
SCN4B-202ENST00000415030 HYPKQ9NX55 129 aa13.57□□□□□ -0.24
SCN4B-202ENST00000415030 CPLX1O14810 134 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 FAM193AP78312 1265 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 HOOK1Q9UJC3 728 aaKnown RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 TTC21AQ8NDW8 1320 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 ERICH4A6NGS2 130 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 NGLY1Q96IV0 654 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 MROH2AA6NES4 1674 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 FLT4P35916 1363 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 CPA1P15085 419 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 CPLX2Q6PUV4 134 aaKnown RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 UNC5CLQ8IV45 518 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 CCAR1Q8IX12 1150 aaKnown RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 DDX11Q96FC9 970 aa13.56□□□□□ -0.24
SCN4B-202ENST00000415030 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
SCN4B-202ENST00000415030 DHX16O60231 1041 aaKnown RBP13.55□□□□□ -0.24
SCN4B-202ENST00000415030 IGSF3O75054 1194 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
SCN4B-202ENST00000415030 AK7Q96M32 723 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 HECW2Q9P2P5 1572 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
SCN4B-202ENST00000415030 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 ATP2B3Q16720 1220 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 RIC3Q7Z5B4 369 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 MRVI1Q9Y6F6 885 aa13.55□□□□□ -0.24
SCN4B-202ENST00000415030 PI4KAP2A4QPH2 592 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 PI4KAP1Q8N8J0 262 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 NEK1Q96PY6 1258 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 PPLO60437 1756 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 CDC25BP30305 580 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 LIG1P18858 919 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
SCN4B-202ENST00000415030 ATL3Q6DD88 541 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
SCN4B-202ENST00000415030 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
SCN4B-202ENST00000415030 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
SCN4B-202ENST00000415030 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 ABCA9Q8IUA7 1624 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 ME3Q16798 604 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
SCN4B-202ENST00000415030 ZSCAN12O43309 604 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 NOM1Q5C9Z4 860 aaKnown RBP13.53□□□□□ -0.24
SCN4B-202ENST00000415030 ANKRD7Q92527 254 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 TTC14Q96N46 770 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
SCN4B-202ENST00000415030 FRMPD1Q5SYB0 1578 aa13.53□□□□□ -0.24
SCN4B-202ENST00000415030 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms