RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 KSR2Q6VAB6 950 aa32.41■■■□□ 2.78
CPNE1-207ENST00000414664 ARFGEF1Q9Y6D6 1849 aa32.41■■■□□ 2.78
CPNE1-207ENST00000414664 CACNA1FO60840 1977 aa32.41■■■□□ 2.78
CPNE1-207ENST00000414664 NPR1P16066 1061 aa32.4■■■□□ 2.78
CPNE1-207ENST00000414664 TRIM28Q13263 835 aaKnown RBP32.4■■■□□ 2.78
CPNE1-207ENST00000414664 TRMT112Q9UI30 125 aaKnown RBP32.4■■■□□ 2.78
CPNE1-207ENST00000414664 GOLGB1Q14789 3259 aaKnown RBP32.4■■■□□ 2.78
CPNE1-207ENST00000414664 RIC1Q4ADV7 1423 aa32.4■■■□□ 2.78
CPNE1-207ENST00000414664 ARFGEF2Q9Y6D5 1785 aa32.4■■■□□ 2.78
CPNE1-207ENST00000414664 ATP5J2-PTCD1G3V325 749 aa32.39■■■□□ 2.78
CPNE1-207ENST00000414664 ARHGAP27Q6ZUM4 889 aa32.39■■■□□ 2.78
CPNE1-207ENST00000414664 ABCC12Q96J65 1359 aa32.39■■■□□ 2.78
CPNE1-207ENST00000414664 SLC10A5Q5PT55 438 aa32.38■■■□□ 2.77
CPNE1-207ENST00000414664 CDCA7LQ96GN5 454 aa32.38■■■□□ 2.77
CPNE1-207ENST00000414664 METTL22Q9BUU2 404 aaPredicted RBP32.38■■■□□ 2.77
CPNE1-207ENST00000414664 COL11A2P13942 1736 aaPredicted RBP32.37■■■□□ 2.77
CPNE1-207ENST00000414664 SH3TC1Q8TE82 1336 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 PI4KAP2A4QPH2 592 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 FLIIQ13045 1269 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 G2E3Q7L622 706 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 PI4KAP1Q8N8J0 262 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 MYD88Q99836 296 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 MAP3K2Q9Y2U5 619 aa32.37■■■□□ 2.77
CPNE1-207ENST00000414664 NLRP3Q96P20 1036 aa32.36■■■□□ 2.77
CPNE1-207ENST00000414664 TRMT2AQ8IZ69 625 aaKnown RBP32.35■■■□□ 2.77
CPNE1-207ENST00000414664 UTRNP46939 3433 aa32.35■■■□□ 2.77
CPNE1-207ENST00000414664 ALDH1B1P30837 517 aa32.34■■■□□ 2.77
CPNE1-207ENST00000414664 HNRNPUQ00839 825 aaKnown RBP eCLIP32.34■■■□□ 2.77
CPNE1-207ENST00000414664 NEXNQ0ZGT2 675 aa32.34■■■□□ 2.77
CPNE1-207ENST00000414664 FKBP5Q13451 457 aaPredicted RBP32.34■■■□□ 2.77
CPNE1-207ENST00000414664 CRY2Q49AN0 593 aa32.34■■■□□ 2.77
CPNE1-207ENST00000414664 CCDC191Q8NCU4 936 aa32.33■■■□□ 2.77
CPNE1-207ENST00000414664 RPGRQ92834 1020 aaKnown RBP32.33■■■□□ 2.77
CPNE1-207ENST00000414664 ZNF428Q96B54 188 aa32.32■■■□□ 2.76
CPNE1-207ENST00000414664 ADCY9O60503 1353 aa32.32■■■□□ 2.76
CPNE1-207ENST00000414664 PRPF40BQ6NWY9 871 aaKnown RBP32.31■■■□□ 2.76
CPNE1-207ENST00000414664 TNRC6CQ9HCJ0 1690 aaKnown RBP32.31■■■□□ 2.76
CPNE1-207ENST00000414664 CWC25Q9NXE8 425 aaPredicted RBP32.3■■■□□ 2.76
CPNE1-207ENST00000414664 FAM89AQ96GI7 184 aa32.29■■■□□ 2.76
CPNE1-207ENST00000414664 RBM17Q96I25 401 aaKnown RBP32.29■■■□□ 2.76
CPNE1-207ENST00000414664 C21orf2O43822 256 aa32.28■■■□□ 2.76
CPNE1-207ENST00000414664 HCLS1P14317 486 aaPredicted RBP32.28■■■□□ 2.76
CPNE1-207ENST00000414664 HSP90B1P14625 803 aaKnown RBP32.28■■■□□ 2.76
CPNE1-207ENST00000414664 HOXA10P31260 410 aaPredicted RBP32.28■■■□□ 2.76
CPNE1-207ENST00000414664 SOGA3Q5TF21 947 aa32.28■■■□□ 2.76
CPNE1-207ENST00000414664 ZBTB38Q8NAP3 1195 aaPredicted RBP32.28■■■□□ 2.76
CPNE1-207ENST00000414664 CT47B1P0C2W7 299 aaPredicted RBP32.27■■■□□ 2.76
CPNE1-207ENST00000414664 SYNE4Q8N205 404 aa32.27■■■□□ 2.76
CPNE1-207ENST00000414664 DNAAF4Q8WXU2 420 aa32.27■■■□□ 2.76
CPNE1-207ENST00000414664 ZNF219Q9P2Y4 722 aaPredicted RBP32.26■■■□□ 2.75
CPNE1-207ENST00000414664 CRAMP1Q96RY5 1269 aa32.25■■■□□ 2.75
CPNE1-207ENST00000414664 SLX4Q8IY92 1834 aa32.25■■■□□ 2.75
CPNE1-207ENST00000414664 PCCAP05165 728 aaPredicted RBP32.24■■■□□ 2.75
CPNE1-207ENST00000414664 C3orf67Q6ZVT6 689 aa32.24■■■□□ 2.75
CPNE1-207ENST00000414664 CACNA1SQ13698 1873 aa32.23■■■□□ 2.75
CPNE1-207ENST00000414664 IRS4O14654 1257 aaPredicted RBP32.23■■■□□ 2.75
CPNE1-207ENST00000414664 IGKV5-2P06315 115 aa32.23■■■□□ 2.75
CPNE1-207ENST00000414664 RTL5Q5HYW3 569 aaPredicted RBP32.23■■■□□ 2.75
CPNE1-207ENST00000414664 ALDH1L2Q3SY69 923 aa32.22■■■□□ 2.75
CPNE1-207ENST00000414664 NEURL1BA8MQ27 555 aa32.21■■■□□ 2.75
CPNE1-207ENST00000414664 MRPL50Q8N5N7 158 aaKnown RBP32.21■■■□□ 2.75
CPNE1-207ENST00000414664 C7orf43Q8WVR3 580 aa32.21■■■□□ 2.75
CPNE1-207ENST00000414664 CWF19L2Q2TBE0 894 aaKnown RBP32.2■■■□□ 2.75
CPNE1-207ENST00000414664 LINS1Q8NG48 757 aa32.2■■■□□ 2.75
CPNE1-207ENST00000414664 SSH1Q8WYL5 1049 aa32.2■■■□□ 2.75
CPNE1-207ENST00000414664 CCDC93Q567U6 631 aa32.19■■■□□ 2.74
CPNE1-207ENST00000414664 DDX46Q7L014 1031 aaKnown RBP32.19■■■□□ 2.74
CPNE1-207ENST00000414664 SF3B3Q15393 1217 aaKnown RBP32.18■■■□□ 2.74
CPNE1-207ENST00000414664 C9orf131Q5VYM1 1079 aa32.18■■■□□ 2.74
CPNE1-207ENST00000414664 CC2D2BQ6DHV5 1058 aa32.17■■■□□ 2.74
CPNE1-207ENST00000414664 ZBED9Q6R2W3 1325 aa32.17■■■□□ 2.74
CPNE1-207ENST00000414664 DDX60Q8IY21 1712 aaKnown RBP32.17■■■□□ 2.74
CPNE1-207ENST00000414664 LAMB2P55268 1798 aa32.17■■■□□ 2.74
CPNE1-207ENST00000414664 F6X3S4 739 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 NFKBIEO00221 500 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 LMNB1P20700 586 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 RASSF7Q02833 373 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 RTKN2Q8IZC4 609 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 TMX4Q9H1E5 349 aaPredicted RBP32.16■■■□□ 2.74
CPNE1-207ENST00000414664 PTPRCP08575 1304 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 CDHR2Q9BYE9 1310 aa32.16■■■□□ 2.74
CPNE1-207ENST00000414664 PDE8AO60658 829 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 BBOX1O75936 387 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 GCKRQ14397 625 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 ZNF784Q8NCA9 323 aaPredicted RBP32.15■■■□□ 2.74
CPNE1-207ENST00000414664 TAOK3Q9H2K8 898 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 SMC4Q9NTJ3 1288 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 RNF181Q9P0P0 153 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 ABCC4O15439 1325 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 LTBP3Q9NS15 1303 aa32.15■■■□□ 2.74
CPNE1-207ENST00000414664 PPEF1O14829 653 aaPredicted RBP32.14■■■□□ 2.74
CPNE1-207ENST00000414664 GRIPAP1Q4V328 841 aa32.14■■■□□ 2.74
CPNE1-207ENST00000414664 H7C1W4 665 aa32.13■■■□□ 2.73
CPNE1-207ENST00000414664 FER1L6Q2WGJ9 1857 aa32.13■■■□□ 2.73
CPNE1-207ENST00000414664 BEND3Q5T5X7 828 aa32.13■■■□□ 2.73
CPNE1-207ENST00000414664 JARID2Q92833 1246 aaPredicted RBP32.13■■■□□ 2.73
CPNE1-207ENST00000414664 BCL2L13Q9BXK5 485 aa32.13■■■□□ 2.73
CPNE1-207ENST00000414664 SBF1O95248 1867 aa32.12■■■□□ 2.73
CPNE1-207ENST00000414664 GRAPQ13588 217 aa32.12■■■□□ 2.73
CPNE1-207ENST00000414664 GRAPLQ8TC17 118 aaPredicted RBP32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms