RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 BCL2L13Q9BXK5 485 aa20.98■□□□□ 0.95
LINC00398-201ENST00000414407 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
LINC00398-201ENST00000414407 IGKV5-2P06315 115 aa20.97■□□□□ 0.95
LINC00398-201ENST00000414407 ERFEQ4G0M1 354 aa20.97■□□□□ 0.95
LINC00398-201ENST00000414407 LINS1Q8NG48 757 aa20.97■□□□□ 0.95
LINC00398-201ENST00000414407 TRMT112Q9UI30 125 aaKnown RBP20.97■□□□□ 0.95
LINC00398-201ENST00000414407 SH3TC1Q8TE82 1336 aa20.97■□□□□ 0.95
LINC00398-201ENST00000414407 DPEP1P16444 411 aa20.96■□□□□ 0.95
LINC00398-201ENST00000414407 NUTM1Q86Y26 1132 aa20.96■□□□□ 0.95
LINC00398-201ENST00000414407 CCDC24Q8N4L8 307 aa20.96■□□□□ 0.95
LINC00398-201ENST00000414407 CWC25Q9NXE8 425 aaPredicted RBP20.96■□□□□ 0.95
LINC00398-201ENST00000414407 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 A0A0G2JLW4 131 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 NEURL1BA8MQ27 555 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 H0YIN7 160 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 KCNA3P22001 575 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
LINC00398-201ENST00000414407 ARHGAP45Q92619 1136 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 KIF16BQ96L93 1317 aa20.95■□□□□ 0.94
LINC00398-201ENST00000414407 F6X3S4 739 aa20.94■□□□□ 0.94
LINC00398-201ENST00000414407 PCCAP05165 728 aaPredicted RBP20.94■□□□□ 0.94
LINC00398-201ENST00000414407 BEND3Q5T5X7 828 aa20.94■□□□□ 0.94
LINC00398-201ENST00000414407 C2CD5Q86YS7 1000 aa20.94■□□□□ 0.94
LINC00398-201ENST00000414407 ABCC12Q96J65 1359 aa20.94■□□□□ 0.94
LINC00398-201ENST00000414407 ANKRD31Q8N7Z5 1873 aa20.94■□□□□ 0.94
LINC00398-201ENST00000414407 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
LINC00398-201ENST00000414407 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
LINC00398-201ENST00000414407 PIM2Q9P1W9 311 aa20.93■□□□□ 0.94
LINC00398-201ENST00000414407 NOB1Q9ULX3 412 aaKnown RBP20.93■□□□□ 0.94
LINC00398-201ENST00000414407 SRGNP10124 158 aa20.92■□□□□ 0.94
LINC00398-201ENST00000414407 CHRNA5P30532 468 aa20.92■□□□□ 0.94
LINC00398-201ENST00000414407 CWF19L2Q2TBE0 894 aaKnown RBP20.92■□□□□ 0.94
LINC00398-201ENST00000414407 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
LINC00398-201ENST00000414407 FAM89AQ96GI7 184 aa20.92■□□□□ 0.94
LINC00398-201ENST00000414407 NLRP3Q96P20 1036 aa20.92■□□□□ 0.94
LINC00398-201ENST00000414407 API5Q9BZZ5 524 aaKnown RBP20.92■□□□□ 0.94
LINC00398-201ENST00000414407 DCAF8L1A6NGE4 600 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
LINC00398-201ENST00000414407 BCAR3O75815 825 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 ALDH1L1O75891 902 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 GCKRQ14397 625 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 STYK1Q6J9G0 422 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 MASTLQ96GX5 879 aa20.91■□□□□ 0.94
LINC00398-201ENST00000414407 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
LINC00398-201ENST00000414407 CDHR2Q9BYE9 1310 aa20.9■□□□□ 0.94
LINC00398-201ENST00000414407 SRCIN1Q9C0H9 1055 aa20.9■□□□□ 0.94
LINC00398-201ENST00000414407 H7C1W4 665 aa20.89■□□□□ 0.93
LINC00398-201ENST00000414407 NPR1P16066 1061 aa20.89■□□□□ 0.93
LINC00398-201ENST00000414407 SLC4A10Q6U841 1118 aa20.89■□□□□ 0.93
LINC00398-201ENST00000414407 SYNE4Q8N205 404 aa20.89■□□□□ 0.93
LINC00398-201ENST00000414407 DLEC1Q9Y238 1755 aa20.89■□□□□ 0.93
LINC00398-201ENST00000414407 IRS4O14654 1257 aaPredicted RBP20.88■□□□□ 0.93
LINC00398-201ENST00000414407 HOXA10P31260 410 aaPredicted RBP20.88■□□□□ 0.93
LINC00398-201ENST00000414407 GPR162Q16538 588 aa20.88■□□□□ 0.93
LINC00398-201ENST00000414407 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
LINC00398-201ENST00000414407 TTLL6Q8N841 843 aa20.88■□□□□ 0.93
LINC00398-201ENST00000414407 CNKSR1Q969H4 720 aa20.88■□□□□ 0.93
LINC00398-201ENST00000414407 HCLS1P14317 486 aaPredicted RBP20.87■□□□□ 0.93
LINC00398-201ENST00000414407 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC00398-201ENST00000414407 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
LINC00398-201ENST00000414407 TNRC6CQ9HCJ0 1690 aaKnown RBP20.86■□□□□ 0.93
LINC00398-201ENST00000414407 GRIN3BO60391 1043 aa20.86■□□□□ 0.93
LINC00398-201ENST00000414407 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
LINC00398-201ENST00000414407 SF3B3Q15393 1217 aaKnown RBP20.86■□□□□ 0.93
LINC00398-201ENST00000414407 ATF7IPQ6VMQ6 1270 aa20.86■□□□□ 0.93
LINC00398-201ENST00000414407 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
LINC00398-201ENST00000414407 PDE8AO60658 829 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 YBX3P16989 372 aaKnown RBP eCLIP20.85■□□□□ 0.93
LINC00398-201ENST00000414407 CCT4P50991 539 aaKnown RBP20.85■□□□□ 0.93
LINC00398-201ENST00000414407 CASP7P55210 303 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 RTL5Q5HYW3 569 aaPredicted RBP20.85■□□□□ 0.93
LINC00398-201ENST00000414407 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 C3orf67Q6ZVT6 689 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
LINC00398-201ENST00000414407 RBM17Q96I25 401 aaKnown RBP20.85■□□□□ 0.93
LINC00398-201ENST00000414407 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
LINC00398-201ENST00000414407 UBE3BQ7Z3V4 1068 aa20.84■□□□□ 0.93
LINC00398-201ENST00000414407 PELP1Q8IZL8 1130 aaKnown RBP20.84■□□□□ 0.93
LINC00398-201ENST00000414407 FRAT1Q92837 279 aaPredicted RBP20.84■□□□□ 0.93
LINC00398-201ENST00000414407 CRAMP1Q96RY5 1269 aa20.84■□□□□ 0.93
LINC00398-201ENST00000414407 PLA2G12BQ9BX93 195 aa20.84■□□□□ 0.93
LINC00398-201ENST00000414407 ABCC4O15439 1325 aa20.83■□□□□ 0.93
LINC00398-201ENST00000414407 LAMB2P55268 1798 aa20.83■□□□□ 0.93
LINC00398-201ENST00000414407 GRM8O00222 908 aa20.83■□□□□ 0.93
LINC00398-201ENST00000414407 TRIM27P14373 513 aa20.83■□□□□ 0.93
LINC00398-201ENST00000414407 C9orf78Q9NZ63 289 aaPredicted RBP20.83■□□□□ 0.93
LINC00398-201ENST00000414407 DDX60Q8IY21 1712 aaKnown RBP20.83■□□□□ 0.92
LINC00398-201ENST00000414407 UTYO14607 1347 aa20.82■□□□□ 0.92
LINC00398-201ENST00000414407 INTS3Q68E01 1043 aaKnown RBP20.82■□□□□ 0.92
LINC00398-201ENST00000414407 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
LINC00398-201ENST00000414407 PRPF40BQ6NWY9 871 aaKnown RBP20.81■□□□□ 0.92
LINC00398-201ENST00000414407 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
LINC00398-201ENST00000414407 DDX46Q7L014 1031 aaKnown RBP20.8■□□□□ 0.92
LINC00398-201ENST00000414407 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
LINC00398-201ENST00000414407 CTSWP56202 376 aa20.79■□□□□ 0.92
LINC00398-201ENST00000414407 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
LINC00398-201ENST00000414407 SOGA3Q5TF21 947 aa20.79■□□□□ 0.92
LINC00398-201ENST00000414407 GOLGB1Q14789 3259 aaKnown RBP20.78■□□□□ 0.92
LINC00398-201ENST00000414407 BBOX1O75936 387 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms