RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SECISBP2LQ93073 1101 aaKnown RBP4.94□□□□□ -1.62
SF3B1-203ENST00000414174 ALG2Q9H553 416 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 RIPOR2Q9Y4F9 1068 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 USP3Q9Y6I4 520 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 LAMC2Q13753 1193 aa4.93□□□□□ -1.62
SF3B1-203ENST00000414174 GRIK4Q16099 956 aa4.93□□□□□ -1.62
SF3B1-203ENST00000414174 ANKRD13AQ8IZ07 590 aa4.93□□□□□ -1.62
SF3B1-203ENST00000414174 PRM3Q9NNZ6 103 aa4.93□□□□□ -1.62
SF3B1-203ENST00000414174 A0A1W2PNR3 127 aa4.92□□□□□ -1.62
SF3B1-203ENST00000414174 TMEM229AB2RXF0 380 aa4.92□□□□□ -1.62
SF3B1-203ENST00000414174 FAM157BP0CG42 384 aa4.92□□□□□ -1.62
SF3B1-203ENST00000414174 NRG1Q02297 640 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-203ENST00000414174 FAM43BQ6ZT52 329 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-203ENST00000414174 TXNRD3Q86VQ6 643 aa4.92□□□□□ -1.62
SF3B1-203ENST00000414174 LENG1Q96BZ8 264 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-203ENST00000414174 UCN2Q96RP3 112 aa4.92□□□□□ -1.62
SF3B1-203ENST00000414174 FAM229AH3BQW9 127 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 M0R082 166 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 KHNYNO15037 678 aaKnown RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SIN3BO75182 1162 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 ATP4AP20648 1035 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 DEKP35659 375 aaKnown RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 GDF10P55107 478 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 USP4Q13107 963 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SEMA3FQ13275 785 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 MBTPS1Q14703 1052 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 MAP7D1Q3KQU3 841 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SAMD5Q5TGI4 173 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SLC51AQ86UW1 340 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 WWC1Q8IX03 1113 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 FTSJ3Q8IY81 847 aaKnown RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 TMTC2Q8N394 836 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 MICALL1Q8N3F8 863 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 ZNF417Q8TAU3 575 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SPATA32Q96LK8 384 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 ZNF587Q96SQ5 575 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 SSBP4Q9BWG4 385 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 IGSF5Q9NSI5 407 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 IQSEC3Q9UPP2 1182 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-203ENST00000414174 PCDHGA11Q9Y5H2 935 aa4.91□□□□□ -1.62
SF3B1-203ENST00000414174 DCDC2BA2VCK2 349 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 EFSO43281 561 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 INHAP05111 366 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 NID1P14543 1247 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 SELPP16109 830 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 SOX11P35716 441 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 TLR1Q15399 786 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 TP53INP1Q96A56 240 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 NIFKQ9BYG3 293 aaKnown RBP4.9□□□□□ -1.63
SF3B1-203ENST00000414174 STARD13Q9Y3M8 1113 aa4.9□□□□□ -1.63
SF3B1-203ENST00000414174 SKIP12755 728 aa4.89□□□□□ -1.63
SF3B1-203ENST00000414174 PLA2G4AP47712 749 aa4.89□□□□□ -1.63
SF3B1-203ENST00000414174 SPTY2D1Q68D10 685 aaPredicted RBP4.89□□□□□ -1.63
SF3B1-203ENST00000414174 NOL8Q76FK4 1167 aaKnown RBP4.89□□□□□ -1.63
SF3B1-203ENST00000414174 SYT9Q86SS6 491 aa4.89□□□□□ -1.63
SF3B1-203ENST00000414174 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
SF3B1-203ENST00000414174 KCNG1Q9UIX4 513 aa4.89□□□□□ -1.63
SF3B1-203ENST00000414174 LAS1LQ9Y4W2 734 aaKnown RBP4.89□□□□□ -1.63
SF3B1-203ENST00000414174 ARID1BQ8NFD5 2236 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-203ENST00000414174 A6NJR5 290 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 SMTNP53814 917 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 NCOA4Q13772 614 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 MTFR1Q15390 333 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 ARSJQ5FYB0 599 aaPredicted RBP4.88□□□□□ -1.63
SF3B1-203ENST00000414174 DEPDC4Q8N2C3 294 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 NFATC2IPQ8NCF5 419 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 TNFRSF25Q93038 417 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 CLUAP1Q96AJ1 413 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 AIDAQ96BJ3 306 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 SLC4A9Q96Q91 983 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 ZIC5Q96T25 663 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 MYH16Q9H6N6 1097 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 STRN4Q9NRL3 753 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 SERTAD1Q9UHV2 236 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 KIAA1024Q9UPX6 916 aa4.88□□□□□ -1.63
SF3B1-203ENST00000414174 USP17L5A8MUK1 530 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 SMARCA5O60264 1052 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-203ENST00000414174 BRD1O95696 1058 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 EPHA4P54764 986 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 GTF2IP78347 998 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 FLIIQ13045 1269 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 TRAPPC3LQ5T215 181 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 C20orf204Q6ZNR8 217 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 FNBP4Q8N3X1 1017 aaPredicted RBP4.87□□□□□ -1.63
SF3B1-203ENST00000414174 SGSM3Q96HU1 749 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
SF3B1-203ENST00000414174 A0A0A0MRY4 1105 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 ALBP02768 609 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 OS9Q13438 667 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-203ENST00000414174 FAM50AQ14320 339 aaKnown RBP4.86□□□□□ -1.63
SF3B1-203ENST00000414174 NBPF1Q3BBV0 1214 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 C8orf86Q6ZUL3 223 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 RETREG2Q8NC44 543 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 ZDHHC1Q8WTX9 485 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 SIRT1Q96EB6 747 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 ZNF358Q9NW07 568 aa4.86□□□□□ -1.63
SF3B1-203ENST00000414174 A6NJY4 79 aa4.85□□□□□ -1.63
SF3B1-203ENST00000414174 ZBTB7BO15156 539 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-203ENST00000414174 TPD52L2O43399 206 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms