RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 DISP2A7MBM2 1401 aa12.97□□□□□ -0.33
HCG27-202ENST00000414008 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
HCG27-202ENST00000414008 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
HCG27-202ENST00000414008 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
HCG27-202ENST00000414008 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
HCG27-202ENST00000414008 RNF223E7ERA6 249 aa12.96□□□□□ -0.33
HCG27-202ENST00000414008 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
HCG27-202ENST00000414008 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
HCG27-202ENST00000414008 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 RSBN1LQ6PCB5 846 aaPredicted RBP12.95□□□□□ -0.34
HCG27-202ENST00000414008 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 FAM160A2Q8N612 972 aaPredicted RBP12.95□□□□□ -0.34
HCG27-202ENST00000414008 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 FAM117AQ9C073 453 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
HCG27-202ENST00000414008 SPTLC1O15269 473 aa12.94□□□□□ -0.34
HCG27-202ENST00000414008 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
HCG27-202ENST00000414008 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
HCG27-202ENST00000414008 ANKLE1Q8NAG6 615 aa12.94□□□□□ -0.34
HCG27-202ENST00000414008 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
HCG27-202ENST00000414008 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
HCG27-202ENST00000414008 PPP2R1AP30153 589 aa12.93□□□□□ -0.34
HCG27-202ENST00000414008 IL13P35225 146 aa12.93□□□□□ -0.34
HCG27-202ENST00000414008 RETREG3Q86VR2 466 aa12.93□□□□□ -0.34
HCG27-202ENST00000414008 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
HCG27-202ENST00000414008 ZCRB1Q8TBF4 217 aaKnown RBP12.93□□□□□ -0.34
HCG27-202ENST00000414008 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
HCG27-202ENST00000414008 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
HCG27-202ENST00000414008 SYMPKQ92797 1274 aaKnown RBP12.92□□□□□ -0.34
HCG27-202ENST00000414008 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
HCG27-202ENST00000414008 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
HCG27-202ENST00000414008 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
HCG27-202ENST00000414008 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
HCG27-202ENST00000414008 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
HCG27-202ENST00000414008 MTMR2Q13614 643 aa12.91□□□□□ -0.34
HCG27-202ENST00000414008 DDX54Q8TDD1 881 aaKnown RBP12.91□□□□□ -0.34
HCG27-202ENST00000414008 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
HCG27-202ENST00000414008 IGSF1Q8N6C5 1336 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 MEGF6O75095 1541 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 TRIM37O94972 964 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 RALBP1Q15311 655 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
HCG27-202ENST00000414008 SULT6B1Q6IMI4 303 aa12.89□□□□□ -0.35
HCG27-202ENST00000414008 PRKD2Q9BZL6 878 aa12.89□□□□□ -0.35
HCG27-202ENST00000414008 PRDM9Q9NQV7 894 aa12.89□□□□□ -0.35
HCG27-202ENST00000414008 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
HCG27-202ENST00000414008 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
HCG27-202ENST00000414008 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
HCG27-202ENST00000414008 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
HCG27-202ENST00000414008 BCL9O00512 1426 aa12.88□□□□□ -0.35
HCG27-202ENST00000414008 MMP16P51512 607 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 TUSC1Q2TAM9 212 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 PRPF38BQ5VTL8 546 aaKnown RBP12.87□□□□□ -0.35
HCG27-202ENST00000414008 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 FCF1Q9Y324 198 aaKnown RBP12.87□□□□□ -0.35
HCG27-202ENST00000414008 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
HCG27-202ENST00000414008 EP400Q96L91 3159 aa12.87□□□□□ -0.35
HCG27-202ENST00000414008 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
HCG27-202ENST00000414008 BAG6P46379 1132 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 DEFB132Q7Z7B7 95 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 LIMD1Q9UGP4 676 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
HCG27-202ENST00000414008 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
HCG27-202ENST00000414008 APBA3O96018 575 aa12.85□□□□□ -0.35
HCG27-202ENST00000414008 HMOX1P09601 288 aa12.85□□□□□ -0.35
HCG27-202ENST00000414008 SKIV2LQ15477 1246 aaKnown RBP12.85□□□□□ -0.35
HCG27-202ENST00000414008 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
HCG27-202ENST00000414008 SH3D19Q5HYK7 790 aa12.85□□□□□ -0.35
HCG27-202ENST00000414008 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
HCG27-202ENST00000414008 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
HCG27-202ENST00000414008 KDRP35968 1356 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 CYP27B1O15528 508 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 JUNDP17535 347 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
HCG27-202ENST00000414008 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
HCG27-202ENST00000414008 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
HCG27-202ENST00000414008 KCNQ2O43526 872 aa12.83□□□□□ -0.36
HCG27-202ENST00000414008 SLC19A1P41440 591 aa12.83□□□□□ -0.36
HCG27-202ENST00000414008 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
HCG27-202ENST00000414008 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
HCG27-202ENST00000414008 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
HCG27-202ENST00000414008 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
HCG27-202ENST00000414008 PHKG2P15735 406 aa12.82□□□□□ -0.36
HCG27-202ENST00000414008 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.36
HCG27-202ENST00000414008 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
HCG27-202ENST00000414008 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
HCG27-202ENST00000414008 PLSCR1O15162 318 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms