RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SND1Q7KZF4 910 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGB1P11-201ENST00000413899 GPR161Q8N6U8 529 aaKnown RBP6.96□□□□□ -1.3
HMGB1P11-201ENST00000413899 ABHD17AQ96GS6 310 aa6.96□□□□□ -1.3
HMGB1P11-201ENST00000413899 GPR25O00155 361 aa6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 KHNYNO15037 678 aaKnown RBP6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 GRNP28799 593 aaKnown RBP6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 GAS6Q14393 721 aa6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
HMGB1P11-201ENST00000413899 FZD6O60353 706 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 EGFRP00533 1210 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 FGFR3P22607 806 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 MZF1P28698 734 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 SFSWAPQ12872 951 aaKnown RBP6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 PIK3R5Q8WYR1 880 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 STRN4Q9NRL3 753 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 MARK1Q9P0L2 795 aa6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
HMGB1P11-201ENST00000413899 TRIM26Q12899 539 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 LCE2AQ5TA79 106 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 TREML4Q6UXN2 200 aa6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 ATCAYQ86WG3 371 aa6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 COL25A1Q9BXS0 654 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 GZF1Q9H116 711 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
HMGB1P11-201ENST00000413899 WFS1O76024 890 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 PDGFAP04085 211 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 RPLP1P05386 114 aaKnown RBP6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 CD33P20138 364 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 CTBSQ01459 385 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 GPR152Q8TDT2 470 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 EDEM1Q92611 657 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 CITED4Q96RK1 184 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 MBIPQ9NS73 344 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 BIN2Q9UBW5 565 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 KCNMB2Q9Y691 235 aa6.92□□□□□ -1.3
HMGB1P11-201ENST00000413899 USP5P45974 858 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 RGL4Q8IZJ4 473 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 GJD3Q8N144 294 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 GSX2Q9BZM3 304 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 CCDC87Q9NVE4 849 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 BRPF3Q9ULD4 1205 aa6.91□□□□□ -1.3
HMGB1P11-201ENST00000413899 C2CD2LO14523 706 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 NDUFB5O43674 189 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 PCSK2P16519 638 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 MX2P20592 715 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 MAP2K3P46734 347 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 KRT76Q01546 638 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 SPEM2Q0P670 501 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 AAMPQ13685 434 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 TRIP4Q15650 581 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 XKR5Q6UX68 686 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 NUDT16Q96DE0 195 aaKnown RBP6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 RBCK1Q9BYM8 510 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 DCTN4Q9UJW0 460 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 POLIQ9UNA4 740 aa6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 NSFL1CQ9UNZ2 370 aaKnown RBP6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
HMGB1P11-201ENST00000413899 XYLBO75191 536 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 BMP4P12644 408 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 DNM1Q05193 864 aaKnown RBP6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 SRSF11Q05519 484 aaKnown RBP6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 CCINQ13939 588 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 SLC30A3Q99726 388 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 USP20Q9Y2K6 914 aa6.89□□□□□ -1.31
HMGB1P11-201ENST00000413899 MAP3K6O95382 1288 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 ARAFP10398 606 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 GMPRP36959 345 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 EHHADHQ08426 723 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 PDE12Q6L8Q7 609 aaKnown RBP6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 FAM129BQ96TA1 746 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 GGNBP2Q9H3C7 697 aa6.88□□□□□ -1.31
HMGB1P11-201ENST00000413899 IGF1RP08069 1367 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 UBAP1LF5GYI3 381 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 IGHA2P01877 340 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 SLURP2P0DP57 97 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 NLRP13Q86W25 1043 aa6.87□□□□□ -1.31
HMGB1P11-201ENST00000413899 SIN3BO75182 1162 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 CCDC27Q2M243 656 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 CNTNAP3BQ96NU0 1288 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 CNTNAP3Q9BZ76 1288 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 PRR12Q9ULL5 1215 aa6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P11-201ENST00000413899 WIPF1O43516 503 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 HOXD8P13378 290 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 ADH6P28332 368 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 MAPK1P28482 360 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 TTC16Q8NEE8 873 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 DMRTB1Q96MA1 342 aa6.85□□□□□ -1.31
HMGB1P11-201ENST00000413899 ASB16Q96NS5 453 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms