RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 RNF123Q5XPI4 1314 aa16.69■□□□□ 0.26
SF1-206ENST00000413725 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
SF1-206ENST00000413725 ST5P78524 1137 aa16.68■□□□□ 0.26
SF1-206ENST00000413725 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
SF1-206ENST00000413725 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
SF1-206ENST00000413725 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
SF1-206ENST00000413725 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
SF1-206ENST00000413725 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
SF1-206ENST00000413725 CACNA1SQ13698 1873 aa16.67■□□□□ 0.26
SF1-206ENST00000413725 DLEC1Q9Y238 1755 aa16.67■□□□□ 0.26
SF1-206ENST00000413725 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
SF1-206ENST00000413725 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
SF1-206ENST00000413725 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
SF1-206ENST00000413725 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 NTSR2O95665 410 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
SF1-206ENST00000413725 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 PRR5LQ6MZQ0 368 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
SF1-206ENST00000413725 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
SF1-206ENST00000413725 TRIM27P14373 513 aa16.65■□□□□ 0.26
SF1-206ENST00000413725 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
SF1-206ENST00000413725 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
SF1-206ENST00000413725 KLHL34Q8N239 644 aa16.65■□□□□ 0.26
SF1-206ENST00000413725 ABCC4O15439 1325 aa16.65■□□□□ 0.26
SF1-206ENST00000413725 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
SF1-206ENST00000413725 KIAA1551Q9HCM1 1747 aa16.65■□□□□ 0.26
SF1-206ENST00000413725 MS4A1P11836 297 aa16.64■□□□□ 0.25
SF1-206ENST00000413725 GCKRQ14397 625 aa16.64■□□□□ 0.25
SF1-206ENST00000413725 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
SF1-206ENST00000413725 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.25
SF1-206ENST00000413725 TNRC6CQ9HCJ0 1690 aaKnown RBP16.64■□□□□ 0.25
SF1-206ENST00000413725 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
SF1-206ENST00000413725 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
SF1-206ENST00000413725 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
SF1-206ENST00000413725 HSP90B1P14625 803 aaKnown RBP16.63■□□□□ 0.25
SF1-206ENST00000413725 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
SF1-206ENST00000413725 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
SF1-206ENST00000413725 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
SF1-206ENST00000413725 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
SF1-206ENST00000413725 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
SF1-206ENST00000413725 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
SF1-206ENST00000413725 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
SF1-206ENST00000413725 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
SF1-206ENST00000413725 SRCAPQ6ZRS2 3230 aa16.61■□□□□ 0.25
SF1-206ENST00000413725 PDE6BP35913 854 aa16.61■□□□□ 0.25
SF1-206ENST00000413725 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
SF1-206ENST00000413725 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
SF1-206ENST00000413725 FHDC1Q9C0D6 1143 aaPredicted RBP16.61■□□□□ 0.25
SF1-206ENST00000413725 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
SF1-206ENST00000413725 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
SF1-206ENST00000413725 GRM8O00222 908 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
SF1-206ENST00000413725 SLC10A5Q5PT55 438 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 TNNQ9UQP3 1299 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 CDHR2Q9BYE9 1310 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 TAF1P21675 1872 aa16.6■□□□□ 0.25
SF1-206ENST00000413725 H7C1W4 665 aa16.59■□□□□ 0.25
SF1-206ENST00000413725 PLIN1O60240 522 aa16.59■□□□□ 0.25
SF1-206ENST00000413725 TGFB2P61812 414 aa16.59■□□□□ 0.25
SF1-206ENST00000413725 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
SF1-206ENST00000413725 HCLS1P14317 486 aaPredicted RBP16.58■□□□□ 0.24
SF1-206ENST00000413725 RRP1P56182 461 aaKnown RBP16.58■□□□□ 0.24
SF1-206ENST00000413725 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SF1-206ENST00000413725 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
SF1-206ENST00000413725 JARID2Q92833 1246 aaPredicted RBP16.58■□□□□ 0.24
SF1-206ENST00000413725 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
SF1-206ENST00000413725 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
SF1-206ENST00000413725 H0YIN7 160 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 PDE8AO60658 829 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 ITPRIPQ8IWB1 547 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 SYT17Q9BSW7 474 aa16.57■□□□□ 0.24
SF1-206ENST00000413725 UTYO14607 1347 aa16.56■□□□□ 0.24
SF1-206ENST00000413725 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
SF1-206ENST00000413725 RLBP1P12271 317 aa16.56■□□□□ 0.24
SF1-206ENST00000413725 CASP7P55210 303 aa16.56■□□□□ 0.24
SF1-206ENST00000413725 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
SF1-206ENST00000413725 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
SF1-206ENST00000413725 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
SF1-206ENST00000413725 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
SF1-206ENST00000413725 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
SF1-206ENST00000413725 DPEP1P16444 411 aa16.55■□□□□ 0.24
SF1-206ENST00000413725 NLGN2Q8NFZ4 835 aa16.55■□□□□ 0.24
SF1-206ENST00000413725 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
SF1-206ENST00000413725 PLA2G12BQ9BX93 195 aa16.55■□□□□ 0.24
SF1-206ENST00000413725 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
SF1-206ENST00000413725 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 GNAI3P08754 354 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
SF1-206ENST00000413725 SRGNP10124 158 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 NPR1P16066 1061 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 CHRNA5P30532 468 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 MASTLQ96GX5 879 aa16.54■□□□□ 0.24
SF1-206ENST00000413725 CTSWP56202 376 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms