RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
FAM238B-201ENST00000413288 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
FAM238B-201ENST00000413288 CWC25Q9NXE8 425 aaPredicted RBP12.35□□□□□ -0.43
FAM238B-201ENST00000413288 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
FAM238B-201ENST00000413288 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
FAM238B-201ENST00000413288 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
FAM238B-201ENST00000413288 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
FAM238B-201ENST00000413288 LINC00116Q8NCU8 138 aa12.34□□□□□ -0.43
FAM238B-201ENST00000413288 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
FAM238B-201ENST00000413288 H7C1W4 665 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 GPTP24298 496 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 CASP7P55210 303 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 MTX1Q13505 466 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
FAM238B-201ENST00000413288 KRT27Q7Z3Y8 459 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 CCDC191Q8NCU4 936 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
FAM238B-201ENST00000413288 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
FAM238B-201ENST00000413288 RGS17Q9UGC6 210 aaPredicted RBP12.33□□□□□ -0.44
FAM238B-201ENST00000413288 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
FAM238B-201ENST00000413288 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
FAM238B-201ENST00000413288 RBM6P78332 1123 aaKnown RBP12.32□□□□□ -0.44
FAM238B-201ENST00000413288 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
FAM238B-201ENST00000413288 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
FAM238B-201ENST00000413288 COL15A1P39059 1388 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 RAB11FIP3O75154 756 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
FAM238B-201ENST00000413288 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
FAM238B-201ENST00000413288 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
FAM238B-201ENST00000413288 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
FAM238B-201ENST00000413288 KLHDC4Q8TBB5 520 aa12.3□□□□□ -0.44
FAM238B-201ENST00000413288 RHPN1Q8TCX5 695 aa12.3□□□□□ -0.44
FAM238B-201ENST00000413288 DDX60Q8IY21 1712 aaKnown RBP12.3□□□□□ -0.44
FAM238B-201ENST00000413288 LAMB2P55268 1798 aa12.3□□□□□ -0.44
FAM238B-201ENST00000413288 FOXO4P98177 505 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 RABL6Q3YEC7 729 aaPredicted RBP12.29□□□□□ -0.44
FAM238B-201ENST00000413288 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 SMIM5Q71RC9 77 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 NLRP10Q86W26 655 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 KIF1BPQ96EK5 621 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
FAM238B-201ENST00000413288 SIL1Q9H173 461 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
FAM238B-201ENST00000413288 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 UBR3Q6ZT12 1888 aa12.29□□□□□ -0.44
FAM238B-201ENST00000413288 TRIM37O94972 964 aa12.28□□□□□ -0.44
FAM238B-201ENST00000413288 CAMTA2O94983 1202 aa12.28□□□□□ -0.44
FAM238B-201ENST00000413288 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
FAM238B-201ENST00000413288 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
FAM238B-201ENST00000413288 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
FAM238B-201ENST00000413288 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
FAM238B-201ENST00000413288 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
FAM238B-201ENST00000413288 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
FAM238B-201ENST00000413288 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
FAM238B-201ENST00000413288 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 SEC24BO95487 1268 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
FAM238B-201ENST00000413288 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 ZNF34Q8IZ26 560 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 SYNE4Q8N205 404 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 UBN2Q6ZU65 1347 aa12.27□□□□□ -0.45
FAM238B-201ENST00000413288 GNPATO15228 680 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 RXRBP28702 533 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 PDE1AP54750 535 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
FAM238B-201ENST00000413288 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 ZBTB38Q8NAP3 1195 aaPredicted RBP12.26□□□□□ -0.45
FAM238B-201ENST00000413288 CCDC85AQ96PX6 553 aaPredicted RBP12.26□□□□□ -0.45
FAM238B-201ENST00000413288 TRMT112Q9UI30 125 aaKnown RBP12.26□□□□□ -0.45
FAM238B-201ENST00000413288 SALL3Q9BXA9 1300 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
FAM238B-201ENST00000413288 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
FAM238B-201ENST00000413288 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
FAM238B-201ENST00000413288 SASH1O94885 1247 aa12.25□□□□□ -0.45
FAM238B-201ENST00000413288 MX1P20591 662 aa12.25□□□□□ -0.45
FAM238B-201ENST00000413288 PTPN12Q05209 780 aaKnown RBP12.25□□□□□ -0.45
FAM238B-201ENST00000413288 SUSD4Q5VX71 490 aa12.25□□□□□ -0.45
FAM238B-201ENST00000413288 COPRSQ9NQ92 184 aa12.25□□□□□ -0.45
FAM238B-201ENST00000413288 DSG3P32926 999 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 COL24A1Q17RW2 1714 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 CLASRPQ8N2M8 674 aaKnown RBP12.24□□□□□ -0.45
FAM238B-201ENST00000413288 ZNF594Q96JF6 807 aaPredicted RBP12.24□□□□□ -0.45
FAM238B-201ENST00000413288 OSBPL3Q9H4L5 887 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
FAM238B-201ENST00000413288 NIP7Q9Y221 180 aaKnown RBP eCLIP12.24□□□□□ -0.45
FAM238B-201ENST00000413288 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
FAM238B-201ENST00000413288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
FAM238B-201ENST00000413288 TAF1P21675 1872 aa12.23□□□□□ -0.45
FAM238B-201ENST00000413288 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
FAM238B-201ENST00000413288 PHF14O94880 888 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms