RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
NUB1-201ENST00000413040 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
NUB1-201ENST00000413040 HCLS1P14317 486 aaPredicted RBP16.54■□□□□ 0.24
NUB1-201ENST00000413040 ME3Q16798 604 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 USP25Q9UHP3 1055 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
NUB1-201ENST00000413040 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
NUB1-201ENST00000413040 ADGRL3Q9HAR2 1447 aa16.53■□□□□ 0.24
NUB1-201ENST00000413040 GIMAP6Q6P9H5 292 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 ERBB3P21860 1342 aa16.52■□□□□ 0.24
NUB1-201ENST00000413040 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.23
NUB1-201ENST00000413040 CHGBP05060 677 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 GCKRQ14397 625 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
NUB1-201ENST00000413040 PDIA6Q15084 440 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 NECTIN1Q15223 517 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 ZNF830Q96NB3 372 aaPredicted RBP16.51■□□□□ 0.23
NUB1-201ENST00000413040 SLC52A2Q9HAB3 445 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 NOL7Q9UMY1 257 aaKnown RBP16.51■□□□□ 0.23
NUB1-201ENST00000413040 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 NFAT5O94916 1531 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 FGD1P98174 961 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
NUB1-201ENST00000413040 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
NUB1-201ENST00000413040 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
NUB1-201ENST00000413040 SLC27A2O14975 620 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 ZSCAN31Q96LW9 406 aaPredicted RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 A0A087WZG4 1122 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 UBE2HP62256 183 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 NEUROD6Q96NK8 337 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 HIP1O00291 1037 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 PSMA5P28066 241 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
NUB1-201ENST00000413040 MTMR6Q9Y217 621 aa16.5■□□□□ 0.23
NUB1-201ENST00000413040 ATF3P18847 181 aa16.49■□□□□ 0.23
NUB1-201ENST00000413040 TFCP2Q12800 502 aa16.49■□□□□ 0.23
NUB1-201ENST00000413040 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
NUB1-201ENST00000413040 TFIP11Q9UBB9 837 aaKnown RBP16.49■□□□□ 0.23
NUB1-201ENST00000413040 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
NUB1-201ENST00000413040 FOSBP53539 338 aa16.49■□□□□ 0.23
NUB1-201ENST00000413040 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
NUB1-201ENST00000413040 PHKG2P15735 406 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 MAP4K1Q92918 833 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 IL17RAQ96F46 866 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
NUB1-201ENST00000413040 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 OFD1O75665 1012 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 CABP4P57796 275 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 DDX46Q7L014 1031 aaKnown RBP16.48■□□□□ 0.23
NUB1-201ENST00000413040 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
NUB1-201ENST00000413040 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
NUB1-201ENST00000413040 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
NUB1-201ENST00000413040 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
NUB1-201ENST00000413040 CAMK4Q16566 473 aa16.47■□□□□ 0.23
NUB1-201ENST00000413040 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
NUB1-201ENST00000413040 HS1BP3Q53T59 392 aa16.47■□□□□ 0.23
NUB1-201ENST00000413040 CDC37L1Q7L3B6 337 aa16.47■□□□□ 0.23
NUB1-201ENST00000413040 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
NUB1-201ENST00000413040 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
NUB1-201ENST00000413040 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
NUB1-201ENST00000413040 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 PKNOX2Q96KN3 472 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
NUB1-201ENST00000413040 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 C19orf44Q9H6X5 657 aa16.46■□□□□ 0.23
NUB1-201ENST00000413040 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.22
NUB1-201ENST00000413040 ADCY5O95622 1261 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
NUB1-201ENST00000413040 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 ARID3AQ99856 593 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
NUB1-201ENST00000413040 KRT85P78386 507 aa16.44■□□□□ 0.22
NUB1-201ENST00000413040 TNNI3KQ59H18 835 aa16.44■□□□□ 0.22
NUB1-201ENST00000413040 TTC12Q9H892 705 aaPredicted RBP16.44■□□□□ 0.22
NUB1-201ENST00000413040 FPGT-TNNI3KV9GXZ4 949 aa16.44■□□□□ 0.22
NUB1-201ENST00000413040 CYP27B1O15528 508 aa16.44■□□□□ 0.22
NUB1-201ENST00000413040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
NUB1-201ENST00000413040 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms