RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
DDR1-230ENST00000412274 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
DDR1-230ENST00000412274 LMNB1P20700 586 aa20.84■□□□□ 0.93
DDR1-230ENST00000412274 HOXA10P31260 410 aaPredicted RBP20.84■□□□□ 0.93
DDR1-230ENST00000412274 GRIPAP1Q4V328 841 aa20.84■□□□□ 0.93
DDR1-230ENST00000412274 C9orf131Q5VYM1 1079 aa20.84■□□□□ 0.93
DDR1-230ENST00000412274 RIC3Q7Z5B4 369 aa20.84■□□□□ 0.93
DDR1-230ENST00000412274 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
DDR1-230ENST00000412274 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
DDR1-230ENST00000412274 LTBP3Q9NS15 1303 aa20.83■□□□□ 0.93
DDR1-230ENST00000412274 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.93
DDR1-230ENST00000412274 C21orf2O43822 256 aa20.83■□□□□ 0.93
DDR1-230ENST00000412274 TSPYL6Q8N831 410 aa20.83■□□□□ 0.93
DDR1-230ENST00000412274 RPGRQ92834 1020 aaKnown RBP20.83■□□□□ 0.93
DDR1-230ENST00000412274 RBM17Q96I25 401 aaKnown RBP20.83■□□□□ 0.93
DDR1-230ENST00000412274 TRMT112Q9UI30 125 aaKnown RBP20.83■□□□□ 0.93
DDR1-230ENST00000412274 SH3TC1Q8TE82 1336 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 CRAMP1Q96RY5 1269 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 RNF181Q9P0P0 153 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 ABCC12Q96J65 1359 aa20.82■□□□□ 0.92
DDR1-230ENST00000412274 CCDC93Q567U6 631 aa20.81■□□□□ 0.92
DDR1-230ENST00000412274 RTKN2Q8IZC4 609 aa20.81■□□□□ 0.92
DDR1-230ENST00000412274 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
DDR1-230ENST00000412274 PHAXQ9H814 394 aaKnown RBP20.8■□□□□ 0.92
DDR1-230ENST00000412274 SLX4Q8IY92 1834 aa20.79■□□□□ 0.92
DDR1-230ENST00000412274 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
DDR1-230ENST00000412274 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
DDR1-230ENST00000412274 SBF1O95248 1867 aa20.79■□□□□ 0.92
DDR1-230ENST00000412274 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
DDR1-230ENST00000412274 NFKBIEO00221 500 aa20.78■□□□□ 0.92
DDR1-230ENST00000412274 KSR2Q6VAB6 950 aa20.78■□□□□ 0.92
DDR1-230ENST00000412274 CCDC191Q8NCU4 936 aa20.78■□□□□ 0.92
DDR1-230ENST00000412274 TMX4Q9H1E5 349 aaPredicted RBP20.78■□□□□ 0.92
DDR1-230ENST00000412274 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
DDR1-230ENST00000412274 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 VAMP4O75379 141 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 RASSF7Q02833 373 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 METTL22Q9BUU2 404 aaPredicted RBP20.77■□□□□ 0.92
DDR1-230ENST00000412274 CACNA1FO60840 1977 aa20.77■□□□□ 0.92
DDR1-230ENST00000412274 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.91
DDR1-230ENST00000412274 EXOSC9Q06265 439 aaKnown RBP20.76■□□□□ 0.91
DDR1-230ENST00000412274 ZNF219Q9P2Y4 722 aaPredicted RBP20.76■□□□□ 0.91
DDR1-230ENST00000412274 E9PSI1 815 aa20.75■□□□□ 0.91
DDR1-230ENST00000412274 ATP5J2-PTCD1G3V325 749 aa20.75■□□□□ 0.91
DDR1-230ENST00000412274 BBOX1O75936 387 aa20.75■□□□□ 0.91
DDR1-230ENST00000412274 FKBP4Q02790 459 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDR1-230ENST00000412274 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
DDR1-230ENST00000412274 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
DDR1-230ENST00000412274 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
DDR1-230ENST00000412274 CACNA1SQ13698 1873 aa20.75■□□□□ 0.91
DDR1-230ENST00000412274 TMC4Q7Z404 712 aa20.74■□□□□ 0.91
DDR1-230ENST00000412274 MYD88Q99836 296 aa20.74■□□□□ 0.91
DDR1-230ENST00000412274 CWC25Q9NXE8 425 aaPredicted RBP20.74■□□□□ 0.91
DDR1-230ENST00000412274 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
DDR1-230ENST00000412274 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
DDR1-230ENST00000412274 DPY19L2Q6NUT2 758 aa20.73■□□□□ 0.91
DDR1-230ENST00000412274 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
DDR1-230ENST00000412274 ZNF526Q8TF50 670 aaPredicted RBP20.73■□□□□ 0.91
DDR1-230ENST00000412274 PSMD1Q99460 953 aa20.73■□□□□ 0.91
DDR1-230ENST00000412274 MAP3K2Q9Y2U5 619 aa20.73■□□□□ 0.91
DDR1-230ENST00000412274 PCCAP05165 728 aaPredicted RBP20.72■□□□□ 0.91
DDR1-230ENST00000412274 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
DDR1-230ENST00000412274 FLIIQ13045 1269 aa20.72■□□□□ 0.91
DDR1-230ENST00000412274 SF3B3Q15393 1217 aaKnown RBP20.72■□□□□ 0.91
DDR1-230ENST00000412274 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
DDR1-230ENST00000412274 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
DDR1-230ENST00000412274 GLTPD2A6NH11 291 aa20.71■□□□□ 0.91
DDR1-230ENST00000412274 PPEF1O14829 653 aaPredicted RBP20.71■□□□□ 0.91
DDR1-230ENST00000412274 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
DDR1-230ENST00000412274 VPS33BQ9H267 617 aa20.71■□□□□ 0.91
DDR1-230ENST00000412274 DICER1Q9UPY3 1922 aaKnown RBP20.7■□□□□ 0.91
DDR1-230ENST00000412274 IRS4O14654 1257 aaPredicted RBP20.7■□□□□ 0.9
DDR1-230ENST00000412274 ATP6V0A2Q9Y487 856 aa20.7■□□□□ 0.9
DDR1-230ENST00000412274 PRELPP51888 382 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 FKBP5Q13451 457 aaPredicted RBP20.69■□□□□ 0.9
DDR1-230ENST00000412274 GRAPQ13588 217 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 C3orf67Q6ZVT6 689 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 GRAPLQ8TC17 118 aaPredicted RBP20.69■□□□□ 0.9
DDR1-230ENST00000412274 ABCC4O15439 1325 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 CCDC88AQ3V6T2 1871 aa20.69■□□□□ 0.9
DDR1-230ENST00000412274 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
DDR1-230ENST00000412274 SUPT20HQ8NEM7 779 aa20.68■□□□□ 0.9
DDR1-230ENST00000412274 CDHR2Q9BYE9 1310 aa20.68■□□□□ 0.9
DDR1-230ENST00000412274 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
DDR1-230ENST00000412274 KIF3CO14782 793 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 PDE8AO60658 829 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 SLFN5Q08AF3 891 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 G2E3Q7L622 706 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 TIAM2Q8IVF5 1701 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 LAMB2P55268 1798 aa20.67■□□□□ 0.9
DDR1-230ENST00000412274 TOMM70O94826 608 aa20.66■□□□□ 0.9
DDR1-230ENST00000412274 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
DDR1-230ENST00000412274 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
DDR1-230ENST00000412274 DNAAF4Q8WXU2 420 aa20.66■□□□□ 0.9
DDR1-230ENST00000412274 SNED1Q8TER0 1413 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms