RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 CCNL1Q9UK58 526 aaPredicted RBP22.43■■□□□ 1.18
CXXC1-202ENST00000412036 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
CXXC1-202ENST00000412036 IL1RAPL2Q9NP60 686 aa22.42■■□□□ 1.18
CXXC1-202ENST00000412036 ANKRD36CQ5JPF3 1778 aa22.42■■□□□ 1.18
CXXC1-202ENST00000412036 NLRP10Q86W26 655 aa22.42■■□□□ 1.18
CXXC1-202ENST00000412036 COL15A1P39059 1388 aa22.41■■□□□ 1.18
CXXC1-202ENST00000412036 RFX5P48382 616 aaPredicted RBP22.41■■□□□ 1.18
CXXC1-202ENST00000412036 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
CXXC1-202ENST00000412036 SALL3Q9BXA9 1300 aa22.4■■□□□ 1.18
CXXC1-202ENST00000412036 GSPT1P15170 499 aaKnown RBP22.4■■□□□ 1.18
CXXC1-202ENST00000412036 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
CXXC1-202ENST00000412036 FAM161AQ3B820 660 aa22.4■■□□□ 1.18
CXXC1-202ENST00000412036 FAM196AQ6ZSG2 479 aa22.4■■□□□ 1.18
CXXC1-202ENST00000412036 CNTNAP4Q9C0A0 1308 aa22.39■■□□□ 1.18
CXXC1-202ENST00000412036 PROM2Q8N271 834 aa22.39■■□□□ 1.17
CXXC1-202ENST00000412036 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
CXXC1-202ENST00000412036 RXRBP28702 533 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 LRRCC1Q9C099 1032 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 SIL1Q9H173 461 aa22.38■■□□□ 1.17
CXXC1-202ENST00000412036 RHPN1Q8TCX5 695 aa22.37■■□□□ 1.17
CXXC1-202ENST00000412036 BCL2L12Q9HB09 334 aa22.37■■□□□ 1.17
CXXC1-202ENST00000412036 SRP68Q9UHB9 627 aaKnown RBP22.37■■□□□ 1.17
CXXC1-202ENST00000412036 BCORQ6W2J9 1755 aa22.37■■□□□ 1.17
CXXC1-202ENST00000412036 SASH1O94885 1247 aa22.36■■□□□ 1.17
CXXC1-202ENST00000412036 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
CXXC1-202ENST00000412036 C4BP0C0L5 1744 aa22.36■■□□□ 1.17
CXXC1-202ENST00000412036 CCDC85AQ96PX6 553 aaPredicted RBP22.36■■□□□ 1.17
CXXC1-202ENST00000412036 GNPATO15228 680 aa22.35■■□□□ 1.17
CXXC1-202ENST00000412036 SUSD4Q5VX71 490 aa22.35■■□□□ 1.17
CXXC1-202ENST00000412036 FAM177BA6PVY3 158 aa22.34■■□□□ 1.17
CXXC1-202ENST00000412036 NUTM1Q86Y26 1132 aa22.34■■□□□ 1.17
CXXC1-202ENST00000412036 PCCAP05165 728 aaPredicted RBP22.34■■□□□ 1.17
CXXC1-202ENST00000412036 ZBTB38Q8NAP3 1195 aaPredicted RBP22.34■■□□□ 1.17
CXXC1-202ENST00000412036 ZNF594Q96JF6 807 aaPredicted RBP22.33■■□□□ 1.16
CXXC1-202ENST00000412036 RPS6KA4O75676 772 aa22.32■■□□□ 1.16
CXXC1-202ENST00000412036 RC3H1Q5TC82 1133 aaKnown RBP22.32■■□□□ 1.16
CXXC1-202ENST00000412036 PDE1AP54750 535 aa22.32■■□□□ 1.16
CXXC1-202ENST00000412036 C4AP0C0L4 1744 aa22.31■■□□□ 1.16
CXXC1-202ENST00000412036 TTC22Q5TAA0 569 aa22.31■■□□□ 1.16
CXXC1-202ENST00000412036 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
CXXC1-202ENST00000412036 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
CXXC1-202ENST00000412036 ARHGEF1Q92888 912 aaKnown RBP22.31■■□□□ 1.16
CXXC1-202ENST00000412036 TRMT112Q9UI30 125 aaKnown RBP22.31■■□□□ 1.16
CXXC1-202ENST00000412036 CHMP3Q9Y3E7 222 aa22.31■■□□□ 1.16
CXXC1-202ENST00000412036 SCN7AQ01118 1682 aa22.3■■□□□ 1.16
CXXC1-202ENST00000412036 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
CXXC1-202ENST00000412036 PHF14O94880 888 aa22.3■■□□□ 1.16
CXXC1-202ENST00000412036 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
CXXC1-202ENST00000412036 COPRSQ9NQ92 184 aa22.3■■□□□ 1.16
CXXC1-202ENST00000412036 RAB11FIP3O75154 756 aa22.29■■□□□ 1.16
CXXC1-202ENST00000412036 HSP90AB3PQ58FF7 597 aa22.29■■□□□ 1.16
CXXC1-202ENST00000412036 NIP7Q9Y221 180 aaKnown RBP eCLIP22.29■■□□□ 1.16
CXXC1-202ENST00000412036 COL4A1P02462 1669 aa22.29■■□□□ 1.16
CXXC1-202ENST00000412036 KIF1BPQ96EK5 621 aa22.29■■□□□ 1.16
CXXC1-202ENST00000412036 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
CXXC1-202ENST00000412036 TLR7Q9NYK1 1049 aaKnown RBP22.29■■□□□ 1.16
CXXC1-202ENST00000412036 HDAC5Q9UQL6 1122 aa22.29■■□□□ 1.16
CXXC1-202ENST00000412036 GOLGB1Q14789 3259 aaKnown RBP22.29■■□□□ 1.16
CXXC1-202ENST00000412036 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
CXXC1-202ENST00000412036 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
CXXC1-202ENST00000412036 NTSR2O95665 410 aa22.28■■□□□ 1.16
CXXC1-202ENST00000412036 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
CXXC1-202ENST00000412036 OS9Q13438 667 aaPredicted RBP22.28■■□□□ 1.16
CXXC1-202ENST00000412036 ATG9AQ7Z3C6 839 aa22.28■■□□□ 1.16
CXXC1-202ENST00000412036 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
CXXC1-202ENST00000412036 IRS4O14654 1257 aaPredicted RBP22.27■■□□□ 1.16
CXXC1-202ENST00000412036 CSF1RP07333 972 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 MX1P20591 662 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 LRRC24Q50LG9 513 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 EAF2Q96CJ1 260 aaPredicted RBP22.27■■□□□ 1.16
CXXC1-202ENST00000412036 DDX60Q8IY21 1712 aaKnown RBP22.27■■□□□ 1.16
CXXC1-202ENST00000412036 CDHR2Q9BYE9 1310 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
CXXC1-202ENST00000412036 TXNRD1Q16881 649 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 TTLL11Q8NHH1 800 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 GREM2Q9H772 168 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 ZBTB47Q9UFB7 747 aaPredicted RBP22.26■■□□□ 1.15
CXXC1-202ENST00000412036 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 RTCBQ9Y3I0 505 aaKnown RBP22.26■■□□□ 1.15
CXXC1-202ENST00000412036 SDSP20132 328 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 C3orf67Q6ZVT6 689 aa22.26■■□□□ 1.15
CXXC1-202ENST00000412036 TNS1Q9HBL0 1735 aaKnown RBP22.25■■□□□ 1.15
CXXC1-202ENST00000412036 MYH3P11055 1940 aa22.25■■□□□ 1.15
CXXC1-202ENST00000412036 TFCP2Q12800 502 aa22.24■■□□□ 1.15
CXXC1-202ENST00000412036 PI4K2BQ8TCG2 481 aa22.24■■□□□ 1.15
CXXC1-202ENST00000412036 STAP2Q9UGK3 403 aa22.24■■□□□ 1.15
CXXC1-202ENST00000412036 G3BP1Q13283 466 aaKnown RBP eCLIP22.24■■□□□ 1.15
CXXC1-202ENST00000412036 CCDC8Q9H0W5 538 aaPredicted RBP22.24■■□□□ 1.15
CXXC1-202ENST00000412036 APBA3O96018 575 aa22.23■■□□□ 1.15
CXXC1-202ENST00000412036 CTSWP56202 376 aa22.23■■□□□ 1.15
CXXC1-202ENST00000412036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.23■■□□□ 1.15
CXXC1-202ENST00000412036 ZNF827Q17R98 1081 aa22.23■■□□□ 1.15
CXXC1-202ENST00000412036 CCDC24Q8N4L8 307 aa22.23■■□□□ 1.15
CXXC1-202ENST00000412036 AK7Q96M32 723 aa22.23■■□□□ 1.15
CXXC1-202ENST00000412036 MAP4K4O95819 1239 aaPredicted RBP22.22■■□□□ 1.15
CXXC1-202ENST00000412036 HSP90AB4PQ58FF6 505 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms