RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 COPS6Q7L5N1 327 aa11.92□□□□□ -0.5
BRCC3-207ENST00000411985 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
BRCC3-207ENST00000411985 CNKSR1Q969H4 720 aa11.92□□□□□ -0.5
BRCC3-207ENST00000411985 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-207ENST00000411985 LRRC37AA6NMS7 1700 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 SCN4AP35499 1836 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 KLRG2A4D1S0 409 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-207ENST00000411985 C21orf2O43822 256 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 NPR1P16066 1061 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
BRCC3-207ENST00000411985 PPP1R42Q7Z4L9 355 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 RNF181Q9P0P0 153 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
BRCC3-207ENST00000411985 NTSR2O95665 410 aa11.9□□□□□ -0.5
BRCC3-207ENST00000411985 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
BRCC3-207ENST00000411985 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
BRCC3-207ENST00000411985 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
BRCC3-207ENST00000411985 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 ZC3H4Q9UPT8 1303 aaKnown RBP11.89□□□□□ -0.51
BRCC3-207ENST00000411985 NFKBIEO00221 500 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
BRCC3-207ENST00000411985 LMNB1P20700 586 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 SOGA3Q5TF21 947 aa11.89□□□□□ -0.51
BRCC3-207ENST00000411985 IL16Q14005 1332 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 ALDH1B1P30837 517 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 POLA2Q14181 598 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 FAM9BQ8IZU0 186 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 C8orf58Q8NAV2 365 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
BRCC3-207ENST00000411985 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
BRCC3-207ENST00000411985 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
BRCC3-207ENST00000411985 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 PRELPP51888 382 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
BRCC3-207ENST00000411985 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 TAOK3Q9H2K8 898 aa11.87□□□□□ -0.51
BRCC3-207ENST00000411985 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 CCDC93Q567U6 631 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 TSPYL6Q8N831 410 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 C7orf43Q8WVR3 580 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
BRCC3-207ENST00000411985 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
BRCC3-207ENST00000411985 SNED1Q8TER0 1413 aa11.86□□□□□ -0.51
BRCC3-207ENST00000411985 KIF3CO14782 793 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 WDR63Q8IWG1 891 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 LTBP1Q14766 1721 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 SH3TC1Q8TE82 1336 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
BRCC3-207ENST00000411985 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 PSME4Q14997 1843 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 HOXA10P31260 410 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-207ENST00000411985 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
BRCC3-207ENST00000411985 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 RBM17Q96I25 401 aaKnown RBP11.84□□□□□ -0.51
BRCC3-207ENST00000411985 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 NMRK2Q9NPI5 230 aa11.84□□□□□ -0.51
BRCC3-207ENST00000411985 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
BRCC3-207ENST00000411985 FKBP4Q02790 459 aaKnown RBP eCLIP11.83□□□□□ -0.52
BRCC3-207ENST00000411985 OLFM4Q6UX06 510 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 COL4A1P02462 1669 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 CEP350Q5VT06 3117 aa11.83□□□□□ -0.52
BRCC3-207ENST00000411985 GLTPD2A6NH11 291 aa11.82□□□□□ -0.52
BRCC3-207ENST00000411985 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
BRCC3-207ENST00000411985 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-207ENST00000411985 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
BRCC3-207ENST00000411985 ABCC4O15439 1325 aa11.82□□□□□ -0.52
BRCC3-207ENST00000411985 TOMM70O94826 608 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
BRCC3-207ENST00000411985 TRIM28Q13263 835 aaKnown RBP11.81□□□□□ -0.52
BRCC3-207ENST00000411985 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 MYD88Q99836 296 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 RRAGCQ9HB90 399 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 COL4A5P29400 1685 aa11.81□□□□□ -0.52
BRCC3-207ENST00000411985 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
BRCC3-207ENST00000411985 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
BRCC3-207ENST00000411985 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-207ENST00000411985 FAM89AQ96GI7 184 aa11.8□□□□□ -0.52
BRCC3-207ENST00000411985 PSMD1Q99460 953 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms