RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
TOM1-204ENST00000411850 CNPY2Q9Y2B0 182 aa20.26■□□□□ 0.83
TOM1-204ENST00000411850 ERBB3P21860 1342 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 LARGE1O95461 756 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 TERF1P54274 439 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
TOM1-204ENST00000411850 UBE2HP62256 183 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■■■□□ 16.4
TOM1-204ENST00000411850 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 CCDC183Q5T5S1 534 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 TCHHQ07283 1943 aa20.25■□□□□ 0.83
TOM1-204ENST00000411850 LETM1O95202 739 aaPredicted RBP20.24■□□□□ 0.83
TOM1-204ENST00000411850 LARP6Q9BRS8 491 aaKnown RBP20.24■□□□□ 0.83
TOM1-204ENST00000411850 COL18A1P39060 1754 aa20.24■□□□□ 0.83
TOM1-204ENST00000411850 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
TOM1-204ENST00000411850 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
TOM1-204ENST00000411850 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
TOM1-204ENST00000411850 EAF2Q96CJ1 260 aaPredicted RBP20.24■□□□□ 0.83
TOM1-204ENST00000411850 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
TOM1-204ENST00000411850 GJB2P29033 226 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
TOM1-204ENST00000411850 CCDC83Q8IWF9 413 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
TOM1-204ENST00000411850 ABCC6O95255 1503 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 MRC1P22897 1456 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 CREB3L3Q68CJ9 461 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 MTMR6Q9Y217 621 aa20.22■□□□□ 0.83
TOM1-204ENST00000411850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
TOM1-204ENST00000411850 NMIQ13287 307 aaPredicted RBP20.21■□□□□ 0.83
TOM1-204ENST00000411850 CSPP1Q1MSJ5 1256 aa20.21■□□□□ 0.83
TOM1-204ENST00000411850 BRINP3Q76B58 766 aa20.21■□□□□ 0.83
TOM1-204ENST00000411850 AIMP1Q12904 312 aaKnown RBP20.21■□□□□ 0.83
TOM1-204ENST00000411850 ZNF790Q6PG37 636 aa20.21■□□□□ 0.83
TOM1-204ENST00000411850 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
TOM1-204ENST00000411850 RRP9O43818 475 aaKnown RBP20.2■□□□□ 0.82
TOM1-204ENST00000411850 PDIA4P13667 645 aaKnown RBP20.2■□□□□ 0.82
TOM1-204ENST00000411850 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
TOM1-204ENST00000411850 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
TOM1-204ENST00000411850 PSMA5P28066 241 aa20.2■□□□□ 0.82
TOM1-204ENST00000411850 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
TOM1-204ENST00000411850 CCDC8Q9H0W5 538 aaPredicted RBP20.2■□□□□ 0.82
TOM1-204ENST00000411850 NEURL1BA8MQ27 555 aa20.19■□□□□ 0.82
TOM1-204ENST00000411850 ME3Q16798 604 aa20.19■□□□□ 0.82
TOM1-204ENST00000411850 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
TOM1-204ENST00000411850 SLC27A2O14975 620 aa20.19■□□□□ 0.82
TOM1-204ENST00000411850 NEXNQ0ZGT2 675 aa20.19■□□□□ 0.82
TOM1-204ENST00000411850 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 C5P01031 1676 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 KCNJ4P48050 445 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 ALDH8A1Q9H2A2 487 aaPredicted RBP20.18■□□□□ 0.82
TOM1-204ENST00000411850 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
TOM1-204ENST00000411850 CPDO75976 1380 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 MED23Q9ULK4 1368 aa20.18■□□□□ 0.82
TOM1-204ENST00000411850 GCKRQ14397 625 aa20.17■□□□□ 0.82
TOM1-204ENST00000411850 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
TOM1-204ENST00000411850 JCADQ9P266 1359 aa20.17■□□□□ 0.82
TOM1-204ENST00000411850 FIBPO43427 364 aa20.17■□□□□ 0.82
TOM1-204ENST00000411850 METTL22Q9BUU2 404 aaPredicted RBP20.17■□□□□ 0.82
TOM1-204ENST00000411850 A0A0D9SFI3 127 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 RNF20Q5VTR2 975 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 RAPGEF4Q8WZA2 1011 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 FSD1Q9BTV5 496 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 TPCN1Q9ULQ1 816 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 SLC39A6Q13433 755 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 BOLA2Q9H3K6 86 aa20.16■□□□□ 0.82
TOM1-204ENST00000411850 DNM1Q05193 864 aaKnown RBP20.15■□□□□ 0.82
TOM1-204ENST00000411850 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
TOM1-204ENST00000411850 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
TOM1-204ENST00000411850 SIL1Q9H173 461 aa20.15■□□□□ 0.82
TOM1-204ENST00000411850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.15■□□□□ 0.82
TOM1-204ENST00000411850 SLAIN2Q9P270 581 aa20.15■□□□□ 0.82
TOM1-204ENST00000411850 TSGA10IPQ3SY00 556 aa20.15■□□□□ 0.82
TOM1-204ENST00000411850 UBE2Q2Q8WVN8 375 aa20.15■□□□□ 0.82
TOM1-204ENST00000411850 PHKG2P15735 406 aa20.14■□□□□ 0.82
TOM1-204ENST00000411850 COPS6Q7L5N1 327 aa20.14■□□□□ 0.82
TOM1-204ENST00000411850 NECAB1Q8N987 351 aa20.14■□□□□ 0.82
TOM1-204ENST00000411850 COPRSQ9NQ92 184 aa20.14■□□□□ 0.82
TOM1-204ENST00000411850 HMG20BQ9P0W2 317 aa20.14■□□□□ 0.82
TOM1-204ENST00000411850 SOS2Q07890 1332 aaPredicted RBP20.14■□□□□ 0.81
TOM1-204ENST00000411850 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 PTMAP06454 111 aaKnown RBP20.14■□□□□ 0.81
TOM1-204ENST00000411850 MYL6BP14649 208 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 MYD88Q99836 296 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 FUCA2Q9BTY2 467 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 NLRP2Q9NX02 1062 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 COL15A1P39059 1388 aa20.14■□□□□ 0.81
TOM1-204ENST00000411850 BLOC1S2Q6QNY1 142 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 PDCP20941 246 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 RPS6KB1P23443 525 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 KLHDC4Q8TBB5 520 aa20.13■□□□□ 0.81
TOM1-204ENST00000411850 DDX54Q8TDD1 881 aaKnown RBP20.13■□□□□ 0.81
TOM1-204ENST00000411850 VPS37CA5D8V6 355 aaPredicted RBP20.12■□□□□ 0.81
TOM1-204ENST00000411850 TATP17735 454 aaPredicted RBP20.12■□□□□ 0.81
TOM1-204ENST00000411850 R3HCC1Q9Y3T6 440 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms