RNA–Protein interactions for RNA: ENST00000411706.1

KLF4-202, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-202ENST00000411706 RIC1Q4ADV7 1423 aa24.62■■□□□ 1.53
KLF4-202ENST00000411706 SRGNP10124 158 aa24.62■■□□□ 1.53
KLF4-202ENST00000411706 ERFEQ4G0M1 354 aa24.62■■□□□ 1.53
KLF4-202ENST00000411706 NUTM1Q86Y26 1132 aa24.62■■□□□ 1.53
KLF4-202ENST00000411706 CNKSR1Q969H4 720 aa24.62■■□□□ 1.53
KLF4-202ENST00000411706 TRIM28Q13263 835 aaKnown RBP24.61■■□□□ 1.53
KLF4-202ENST00000411706 ISCA1Q9BUE6 129 aa24.61■■□□□ 1.53
KLF4-202ENST00000411706 CACNA1SQ13698 1873 aa24.61■■□□□ 1.53
KLF4-202ENST00000411706 TCERG1O14776 1098 aaKnown RBP24.6■■□□□ 1.53
KLF4-202ENST00000411706 NPR1P16066 1061 aa24.6■■□□□ 1.53
KLF4-202ENST00000411706 KSR2Q6VAB6 950 aa24.6■■□□□ 1.53
KLF4-202ENST00000411706 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
KLF4-202ENST00000411706 TRMT112Q9UI30 125 aaKnown RBP24.59■■□□□ 1.53
KLF4-202ENST00000411706 ARHGAP27Q6ZUM4 889 aa24.58■■□□□ 1.53
KLF4-202ENST00000411706 NLRP3Q96P20 1036 aa24.58■■□□□ 1.53
KLF4-202ENST00000411706 METTL22Q9BUU2 404 aaPredicted RBP24.58■■□□□ 1.53
KLF4-202ENST00000411706 SH3TC1Q8TE82 1336 aa24.58■■□□□ 1.52
KLF4-202ENST00000411706 ABCC12Q96J65 1359 aa24.57■■□□□ 1.52
KLF4-202ENST00000411706 ALDH1B1P30837 517 aa24.57■■□□□ 1.52
KLF4-202ENST00000411706 FLIIQ13045 1269 aa24.57■■□□□ 1.52
KLF4-202ENST00000411706 TNRC6CQ9HCJ0 1690 aaKnown RBP24.56■■□□□ 1.52
KLF4-202ENST00000411706 PI4KAP2A4QPH2 592 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 NEXNQ0ZGT2 675 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 CRY2Q49AN0 593 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 TRMT2AQ8IZ69 625 aaKnown RBP24.56■■□□□ 1.52
KLF4-202ENST00000411706 PI4KAP1Q8N8J0 262 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 ZNF428Q96B54 188 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 MYD88Q99836 296 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 MAP3K2Q9Y2U5 619 aa24.56■■□□□ 1.52
KLF4-202ENST00000411706 G2E3Q7L622 706 aa24.55■■□□□ 1.52
KLF4-202ENST00000411706 CCDC191Q8NCU4 936 aa24.55■■□□□ 1.52
KLF4-202ENST00000411706 CDCA7LQ96GN5 454 aa24.55■■□□□ 1.52
KLF4-202ENST00000411706 SLX4Q8IY92 1834 aa24.55■■□□□ 1.52
KLF4-202ENST00000411706 FKBP5Q13451 457 aaPredicted RBP24.54■■□□□ 1.52
KLF4-202ENST00000411706 RPGRQ92834 1020 aaKnown RBP24.54■■□□□ 1.52
KLF4-202ENST00000411706 HSP90B1P14625 803 aaKnown RBP24.53■■□□□ 1.52
KLF4-202ENST00000411706 SOGA3Q5TF21 947 aa24.53■■□□□ 1.52
KLF4-202ENST00000411706 LAMB2P55268 1798 aa24.52■■□□□ 1.52
KLF4-202ENST00000411706 SBF1O95248 1867 aa24.52■■□□□ 1.52
KLF4-202ENST00000411706 CT47B1P0C2W7 299 aaPredicted RBP24.52■■□□□ 1.52
KLF4-202ENST00000411706 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.52
KLF4-202ENST00000411706 PRPF40BQ6NWY9 871 aaKnown RBP24.52■■□□□ 1.52
KLF4-202ENST00000411706 RBM17Q96I25 401 aaKnown RBP24.52■■□□□ 1.52
KLF4-202ENST00000411706 CWC25Q9NXE8 425 aaPredicted RBP24.52■■□□□ 1.52
KLF4-202ENST00000411706 ADCY9O60503 1353 aa24.52■■□□□ 1.52
KLF4-202ENST00000411706 HOXA10P31260 410 aaPredicted RBP24.51■■□□□ 1.51
KLF4-202ENST00000411706 ZBTB38Q8NAP3 1195 aaPredicted RBP24.51■■□□□ 1.51
KLF4-202ENST00000411706 DDX60Q8IY21 1712 aaKnown RBP24.5■■□□□ 1.51
KLF4-202ENST00000411706 FER1L6Q2WGJ9 1857 aa24.5■■□□□ 1.51
KLF4-202ENST00000411706 DNAAF4Q8WXU2 420 aa24.5■■□□□ 1.51
KLF4-202ENST00000411706 CRAMP1Q96RY5 1269 aa24.5■■□□□ 1.51
KLF4-202ENST00000411706 CCDC88AQ3V6T2 1871 aa24.49■■□□□ 1.51
KLF4-202ENST00000411706 C21orf2O43822 256 aa24.49■■□□□ 1.51
KLF4-202ENST00000411706 FAM89AQ96GI7 184 aa24.49■■□□□ 1.51
KLF4-202ENST00000411706 PCCAP05165 728 aaPredicted RBP24.48■■□□□ 1.51
KLF4-202ENST00000411706 HCLS1P14317 486 aaPredicted RBP24.48■■□□□ 1.51
KLF4-202ENST00000411706 ALDH1L2Q3SY69 923 aa24.47■■□□□ 1.51
KLF4-202ENST00000411706 SYNE4Q8N205 404 aa24.47■■□□□ 1.51
KLF4-202ENST00000411706 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
KLF4-202ENST00000411706 ZNF219Q9P2Y4 722 aaPredicted RBP24.46■■□□□ 1.51
KLF4-202ENST00000411706 IGKV5-2P06315 115 aa24.45■■□□□ 1.5
KLF4-202ENST00000411706 CC2D2BQ6DHV5 1058 aa24.45■■□□□ 1.5
KLF4-202ENST00000411706 LINS1Q8NG48 757 aa24.45■■□□□ 1.5
KLF4-202ENST00000411706 C7orf43Q8WVR3 580 aa24.45■■□□□ 1.5
KLF4-202ENST00000411706 NEURL1BA8MQ27 555 aa24.44■■□□□ 1.5
KLF4-202ENST00000411706 SF3B3Q15393 1217 aaKnown RBP24.44■■□□□ 1.5
KLF4-202ENST00000411706 GRIPAP1Q4V328 841 aa24.44■■□□□ 1.5
KLF4-202ENST00000411706 CCDC93Q567U6 631 aa24.44■■□□□ 1.5
KLF4-202ENST00000411706 C3orf67Q6ZVT6 689 aa24.44■■□□□ 1.5
KLF4-202ENST00000411706 DDX46Q7L014 1031 aaKnown RBP24.44■■□□□ 1.5
KLF4-202ENST00000411706 MRPL50Q8N5N7 158 aaKnown RBP24.44■■□□□ 1.5
KLF4-202ENST00000411706 MYH3P11055 1940 aa24.43■■□□□ 1.5
KLF4-202ENST00000411706 CDHR2Q9BYE9 1310 aa24.43■■□□□ 1.5
KLF4-202ENST00000411706 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
KLF4-202ENST00000411706 RTKN2Q8IZC4 609 aa24.43■■□□□ 1.5
KLF4-202ENST00000411706 TMX4Q9H1E5 349 aaPredicted RBP24.43■■□□□ 1.5
KLF4-202ENST00000411706 DICER1Q9UPY3 1922 aaKnown RBP24.43■■□□□ 1.5
KLF4-202ENST00000411706 PTPRCP08575 1304 aa24.42■■□□□ 1.5
KLF4-202ENST00000411706 LTBP3Q9NS15 1303 aa24.42■■□□□ 1.5
KLF4-202ENST00000411706 LMNB1P20700 586 aa24.42■■□□□ 1.5
KLF4-202ENST00000411706 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
KLF4-202ENST00000411706 C9orf131Q5VYM1 1079 aa24.42■■□□□ 1.5
KLF4-202ENST00000411706 SSH1Q8WYL5 1049 aa24.42■■□□□ 1.5
KLF4-202ENST00000411706 ZBED9Q6R2W3 1325 aa24.41■■□□□ 1.5
KLF4-202ENST00000411706 PDE8AO60658 829 aa24.41■■□□□ 1.5
KLF4-202ENST00000411706 BBOX1O75936 387 aa24.41■■□□□ 1.5
KLF4-202ENST00000411706 ZNF784Q8NCA9 323 aaPredicted RBP24.41■■□□□ 1.5
KLF4-202ENST00000411706 TAOK3Q9H2K8 898 aa24.41■■□□□ 1.5
KLF4-202ENST00000411706 NFKBIEO00221 500 aa24.4■■□□□ 1.5
KLF4-202ENST00000411706 PPEF1O14829 653 aaPredicted RBP24.4■■□□□ 1.5
KLF4-202ENST00000411706 RASSF7Q02833 373 aa24.4■■□□□ 1.5
KLF4-202ENST00000411706 GCKRQ14397 625 aa24.4■■□□□ 1.5
KLF4-202ENST00000411706 RNF181Q9P0P0 153 aa24.4■■□□□ 1.5
KLF4-202ENST00000411706 ABCC4O15439 1325 aa24.39■■□□□ 1.5
KLF4-202ENST00000411706 F6X3S4 739 aa24.39■■□□□ 1.49
KLF4-202ENST00000411706 GRAPQ13588 217 aa24.39■■□□□ 1.49
KLF4-202ENST00000411706 TMC4Q7Z404 712 aa24.39■■□□□ 1.49
KLF4-202ENST00000411706 GRAPLQ8TC17 118 aaPredicted RBP24.39■■□□□ 1.49
KLF4-202ENST00000411706 SMC4Q9NTJ3 1288 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms