RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 EMILIN3Q9NT22 766 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
LINC00396-201ENST00000411690 SPG7Q9UQ90 795 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 CNTNAP4Q9C0A0 1308 aa9□□□□□ -0.97
LINC00396-201ENST00000411690 A0A1W2PP64 1363 aa8.99□□□□□ -0.97
LINC00396-201ENST00000411690 DDNO94850 711 aaPredicted RBP8.99□□□□□ -0.97
LINC00396-201ENST00000411690 PDE4AP27815 886 aa8.99□□□□□ -0.97
LINC00396-201ENST00000411690 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
LINC00396-201ENST00000411690 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
LINC00396-201ENST00000411690 CCDC88AQ3V6T2 1871 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 IQCA1LA6NCM1 817 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
LINC00396-201ENST00000411690 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
LINC00396-201ENST00000411690 MCOLN1Q9GZU1 580 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 KDRP35968 1356 aa8.98□□□□□ -0.97
LINC00396-201ENST00000411690 TM4SF1P30408 202 aa8.97□□□□□ -0.97
LINC00396-201ENST00000411690 HSP90AB2PQ58FF8 381 aa8.97□□□□□ -0.97
LINC00396-201ENST00000411690 ABT1Q9ULW3 272 aaKnown RBP8.97□□□□□ -0.97
LINC00396-201ENST00000411690 USP42Q9H9J4 1324 aaKnown RBP8.97□□□□□ -0.97
LINC00396-201ENST00000411690 ROCK2O75116 1388 aaKnown RBP8.97□□□□□ -0.97
LINC00396-201ENST00000411690 GFRA3O60609 400 aa8.96□□□□□ -0.98
LINC00396-201ENST00000411690 EAPPQ56P03 285 aaPredicted RBP8.96□□□□□ -0.98
LINC00396-201ENST00000411690 PRPF38BQ5VTL8 546 aaKnown RBP8.96□□□□□ -0.98
LINC00396-201ENST00000411690 TRAF7Q6Q0C0 670 aa8.96□□□□□ -0.98
LINC00396-201ENST00000411690 IFNL2Q8IZJ0 200 aa8.96□□□□□ -0.98
LINC00396-201ENST00000411690 DDX27Q96GQ7 796 aaKnown RBP8.96□□□□□ -0.98
LINC00396-201ENST00000411690 TAF1DQ9H5J8 278 aaPredicted RBP8.96□□□□□ -0.98
LINC00396-201ENST00000411690 TSKSQ9UJT2 592 aa8.96□□□□□ -0.98
LINC00396-201ENST00000411690 INSRP06213 1382 aa8.96□□□□□ -0.98
LINC00396-201ENST00000411690 H0YIN7 160 aa8.95□□□□□ -0.98
LINC00396-201ENST00000411690 PHKG2P15735 406 aa8.95□□□□□ -0.98
LINC00396-201ENST00000411690 CRKLP46109 303 aaKnown RBP8.95□□□□□ -0.98
LINC00396-201ENST00000411690 PAXIP1Q6ZW49 1069 aaPredicted RBP8.95□□□□□ -0.98
LINC00396-201ENST00000411690 C2CD5Q86YS7 1000 aa8.95□□□□□ -0.98
LINC00396-201ENST00000411690 GPR101Q96P66 508 aaPredicted RBP8.95□□□□□ -0.98
LINC00396-201ENST00000411690 ZPR1O75312 459 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 ECE1P42892 770 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 GRM1Q13255 1194 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 DGKZQ13574 1117 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 MFSD10Q14728 455 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 LAPTM4AQ15012 233 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 CNTROBQ8N137 903 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 CAPNS2Q96L46 248 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 ZNF831Q5JPB2 1677 aa8.94□□□□□ -0.98
LINC00396-201ENST00000411690 COL5A3P25940 1745 aaPredicted RBP8.94□□□□□ -0.98
LINC00396-201ENST00000411690 C21orf2O43822 256 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 SERPINB2P05120 415 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 USPL1Q5W0Q7 1092 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 ZNF622Q969S3 477 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC00396-201ENST00000411690 TAOK3Q9H2K8 898 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 FLT4P35916 1363 aa8.93□□□□□ -0.98
LINC00396-201ENST00000411690 DICER1Q9UPY3 1922 aaKnown RBP8.92□□□□□ -0.98
LINC00396-201ENST00000411690 LTBP3Q9NS15 1303 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 ERVV-2B6SEH9 535 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 PTCD1O75127 700 aaKnown RBP8.92□□□□□ -0.98
LINC00396-201ENST00000411690 EPHX2P34913 555 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 NFIXQ14938 502 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 MAP1SQ66K74 1059 aaPredicted RBP8.92□□□□□ -0.98
LINC00396-201ENST00000411690 CYP4F22Q6NT55 531 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 PUS7Q96PZ0 661 aaKnown RBP8.92□□□□□ -0.98
LINC00396-201ENST00000411690 GGNBP2Q9H3C7 697 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 HACL1Q9UJ83 578 aa8.92□□□□□ -0.98
LINC00396-201ENST00000411690 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
LINC00396-201ENST00000411690 SCN4AP35499 1836 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 DLEC1Q9Y238 1755 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 KIF24Q5T7B8 1368 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 FYB1O15117 783 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 CA12O43570 354 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 MAP2K2P36507 400 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 SOX10P56693 466 aa8.91□□□□□ -0.98
LINC00396-201ENST00000411690 PNMA8AQ86V59 439 aaPredicted RBP8.91□□□□□ -0.98
LINC00396-201ENST00000411690 DDX21Q9NR30 783 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00396-201ENST00000411690 RYDENQ9NUL5 291 aaKnown RBP8.91□□□□□ -0.98
LINC00396-201ENST00000411690 TSR3Q9UJK0 312 aaKnown RBP8.91□□□□□ -0.98
LINC00396-201ENST00000411690 TONSLQ96HA7 1378 aa8.9□□□□□ -0.98
LINC00396-201ENST00000411690 TRIM6-TRIM34B2RNG4 842 aa8.9□□□□□ -0.98
LINC00396-201ENST00000411690 CABP4P57796 275 aa8.9□□□□□ -0.98
LINC00396-201ENST00000411690 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
LINC00396-201ENST00000411690 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.9□□□□□ -0.98
LINC00396-201ENST00000411690 THSD7BQ9C0I4 1608 aa8.9□□□□□ -0.99
LINC00396-201ENST00000411690 PDE4DIPQ5VU43 2346 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 FER1L6Q2WGJ9 1857 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 AFDNP55196 1824 aaKnown RBP8.89□□□□□ -0.99
LINC00396-201ENST00000411690 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
LINC00396-201ENST00000411690 AOC2O75106 756 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
LINC00396-201ENST00000411690 INTS5Q6P9B9 1019 aaKnown RBP8.89□□□□□ -0.99
LINC00396-201ENST00000411690 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
LINC00396-201ENST00000411690 NCAPD2Q15021 1401 aa8.88□□□□□ -0.99
LINC00396-201ENST00000411690 NRXN2Q9P2S2 1712 aa8.88□□□□□ -0.99
LINC00396-201ENST00000411690 CARMIL3Q8ND23 1372 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms