RNA–Protein interactions for RNA: ENST00000411496.1

TTC3-205, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-205ENST00000411496 BRD7Q9NPI1 651 aa9.31□□□□□ -0.92
TTC3-205ENST00000411496 PODXL2Q9NZ53 605 aa9.31□□□□□ -0.92
TTC3-205ENST00000411496 DCTN4Q9UJW0 460 aa9.31□□□□□ -0.92
TTC3-205ENST00000411496 EFSO43281 561 aa9.3□□□□□ -0.92
TTC3-205ENST00000411496 FZD6O60353 706 aa9.3□□□□□ -0.92
TTC3-205ENST00000411496 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
TTC3-205ENST00000411496 RTCBQ9Y3I0 505 aaKnown RBP9.3□□□□□ -0.92
TTC3-205ENST00000411496 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
TTC3-205ENST00000411496 CDC14CA4D256 554 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 H3BM21 787 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 BNIP3LO60238 219 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 MAPTP10636 758 aaKnown RBP9.29□□□□□ -0.92
TTC3-205ENST00000411496 ATCAYQ86WG3 371 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 GPR152Q8TDT2 470 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 SLC16A10Q8TF71 515 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 RBCK1Q9BYM8 510 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 KCNH4Q9UQ05 1017 aa9.29□□□□□ -0.92
TTC3-205ENST00000411496 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
TTC3-205ENST00000411496 ERCC3P19447 782 aa9.28□□□□□ -0.92
TTC3-205ENST00000411496 DNM1Q05193 864 aaKnown RBP9.28□□□□□ -0.92
TTC3-205ENST00000411496 PDE3BQ13370 1112 aa9.28□□□□□ -0.92
TTC3-205ENST00000411496 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
TTC3-205ENST00000411496 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
TTC3-205ENST00000411496 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
TTC3-205ENST00000411496 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.93
TTC3-205ENST00000411496 PDGFAP04085 211 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 VSIG8P0DPA2 414 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 MAPK1P28482 360 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 EHHADHQ08426 723 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 FAM182BQ5T319 152 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 RGL4Q8IZJ4 473 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 EDEM1Q92611 657 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 POLIQ9UNA4 740 aa9.27□□□□□ -0.93
TTC3-205ENST00000411496 DCDC2BA2VCK2 349 aa9.26□□□□□ -0.93
TTC3-205ENST00000411496 EGFRP00533 1210 aa9.26□□□□□ -0.93
TTC3-205ENST00000411496 MFAP1P55081 439 aaKnown RBP9.26□□□□□ -0.93
TTC3-205ENST00000411496 CMTR1Q8N1G2 835 aaKnown RBP9.26□□□□□ -0.93
TTC3-205ENST00000411496 NUDT16Q96DE0 195 aaKnown RBP9.26□□□□□ -0.93
TTC3-205ENST00000411496 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
TTC3-205ENST00000411496 FGFR3P22607 806 aa9.25□□□□□ -0.93
TTC3-205ENST00000411496 SFSWAPQ12872 951 aaKnown RBP9.25□□□□□ -0.93
TTC3-205ENST00000411496 GJD3Q8N144 294 aa9.25□□□□□ -0.93
TTC3-205ENST00000411496 DMRTB1Q96MA1 342 aa9.25□□□□□ -0.93
TTC3-205ENST00000411496 PDE12Q6L8Q7 609 aaKnown RBP9.24□□□□□ -0.93
TTC3-205ENST00000411496 XKR5Q6UX68 686 aa9.24□□□□□ -0.93
TTC3-205ENST00000411496 ASB16Q96NS5 453 aa9.24□□□□□ -0.93
TTC3-205ENST00000411496 KCNMB2Q9Y691 235 aa9.24□□□□□ -0.93
TTC3-205ENST00000411496 XYLBO75191 536 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 VEGFBP49765 207 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 NEUROD1Q13562 356 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 CCINQ13939 588 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 TMC1Q8TDI8 760 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 IRF7Q92985 503 aa9.23□□□□□ -0.93
TTC3-205ENST00000411496 NSFL1CQ9UNZ2 370 aaKnown RBP9.23□□□□□ -0.93
TTC3-205ENST00000411496 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 GPR25O00155 361 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 NEFLP07196 543 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
TTC3-205ENST00000411496 C8orf34Q49A92 452 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 FAM129BQ96TA1 746 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 STRN4Q9NRL3 753 aa9.22□□□□□ -0.93
TTC3-205ENST00000411496 CD33P20138 364 aa9.21□□□□□ -0.94
TTC3-205ENST00000411496 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
TTC3-205ENST00000411496 DNAJC14Q6Y2X3 702 aaPredicted RBP9.21□□□□□ -0.94
TTC3-205ENST00000411496 GGNBP2Q9H3C7 697 aa9.21□□□□□ -0.94
TTC3-205ENST00000411496 USP20Q9Y2K6 914 aa9.21□□□□□ -0.94
TTC3-205ENST00000411496 MX2P20592 715 aa9.2□□□□□ -0.94
TTC3-205ENST00000411496 SPEM2Q0P670 501 aa9.2□□□□□ -0.94
TTC3-205ENST00000411496 COL19A1Q14993 1142 aa9.2□□□□□ -0.94
TTC3-205ENST00000411496 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
TTC3-205ENST00000411496 NLRP13Q86W25 1043 aa9.2□□□□□ -0.94
TTC3-205ENST00000411496 ALKBH8Q96BT7 664 aaKnown RBP9.2□□□□□ -0.94
TTC3-205ENST00000411496 CTBSQ01459 385 aa9.19□□□□□ -0.94
TTC3-205ENST00000411496 TRIP4Q15650 581 aaPredicted RBP9.19□□□□□ -0.94
TTC3-205ENST00000411496 GPR161Q8N6U8 529 aaKnown RBP9.19□□□□□ -0.94
TTC3-205ENST00000411496 PNMA5Q96PV4 448 aa9.19□□□□□ -0.94
TTC3-205ENST00000411496 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
TTC3-205ENST00000411496 MBIPQ9NS73 344 aa9.19□□□□□ -0.94
TTC3-205ENST00000411496 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
TTC3-205ENST00000411496 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
TTC3-205ENST00000411496 ANKRD33BA6NCL7 494 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 IGHA2P01877 340 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 BMP4P12644 408 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 MAP2K3P46734 347 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 PLCB3Q01970 1234 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 GAS6Q14393 721 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 ELP3Q9H9T3 547 aa9.18□□□□□ -0.94
TTC3-205ENST00000411496 TREHO43280 583 aa9.17□□□□□ -0.94
TTC3-205ENST00000411496 SLC30A3Q99726 388 aa9.17□□□□□ -0.94
TTC3-205ENST00000411496 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
TTC3-205ENST00000411496 SASH3O75995 380 aa9.16□□□□□ -0.94
TTC3-205ENST00000411496 DSC3Q14574 896 aa9.16□□□□□ -0.94
TTC3-205ENST00000411496 TTC39BQ5VTQ0 682 aaPredicted RBP9.16□□□□□ -0.94
TTC3-205ENST00000411496 PMEPA1Q969W9 287 aa9.16□□□□□ -0.94
TTC3-205ENST00000411496 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms