RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 STX8Q9UNK0 236 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 FANCIQ9NVI1 1328 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 KIF5BP33176 963 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 KMT5BQ4FZB7 885 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 SETDB2Q96T68 719 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 PHAXQ9H814 394 aaKnown RBP12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 AMPD3Q01432 767 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 MAP3K11Q16584 847 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 TMEM67Q5HYA8 995 aa12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
PRPF40A-202ENST00000410080 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 SNX16P57768 344 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 CFAP57Q96MR6 1250 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 PCF11O94913 1555 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 CFAP58Q5T655 872 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 UBAP1LF5GYI3 381 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 ZBTB3Q9H5J0 574 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 NAIPQ13075 1403 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 F6X3S4 739 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC175P0C221 793 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 PPP1R42Q7Z4L9 355 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 TCHPQ9BT92 498 aa12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
PRPF40A-202ENST00000410080 MXRA7P84157 204 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 GSTA5Q7RTV2 222 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 ATP6V1AP38606 617 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 CD109Q6YHK3 1445 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 NCAPD3P42695 1498 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
PRPF40A-202ENST00000410080 PDE3AQ14432 1141 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 CAMSAP2Q08AD1 1489 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 AMOTL2Q9Y2J4 779 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 HAND2P61296 217 aa12.87□□□□□ -0.35
PRPF40A-202ENST00000410080 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 FCHSD2O94868 740 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 GABPAQ06546 454 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 GOLIM4O00461 696 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 GSTO1P78417 241 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 JADE2Q9NQC1 790 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
PRPF40A-202ENST00000410080 SYCE3A1L190 88 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 MAP7D1Q3KQU3 841 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 IQCGQ9H095 443 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 MAP3K2Q9Y2U5 619 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 RPGRIP1LQ68CZ1 1315 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 UBXN4Q92575 508 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 SLC26A6Q9BXS9 759 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 BIN1O00499 593 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 GAS8O95995 478 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 TTC12Q9H892 705 aaPredicted RBP12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 YEATS4O95619 227 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 MCM3P25205 808 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
PRPF40A-202ENST00000410080 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 945.4 ms