RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 KAT14Q9H8E8 782 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 GRPEL1Q9HAV7 217 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 USP16Q9Y5T5 823 aa10.57□□□□□ -0.72
PBRM1-208ENST00000410007 RTCBQ9Y3I0 505 aaKnown RBP10.56□□□□□ -0.72
PBRM1-208ENST00000410007 KIF20AO95235 890 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 MATR3P43243 847 aaKnown RBP eCLIP10.56□□□□□ -0.72
PBRM1-208ENST00000410007 EIF5P55010 431 aaKnown RBP10.56□□□□□ -0.72
PBRM1-208ENST00000410007 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 PPP4R3BQ5MIZ7 849 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 PPP4R3AQ6IN85 833 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 CARD14Q9BXL6 1004 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 ANO10Q9NW15 660 aa10.56□□□□□ -0.72
PBRM1-208ENST00000410007 DNMT1P26358 1616 aaKnown RBP10.55□□□□□ -0.72
PBRM1-208ENST00000410007 ADGRL2O95490 1459 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 DESP17661 470 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 CTAGE5O15320 804 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
PBRM1-208ENST00000410007 ERLIN2O94905 339 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 MCM5P33992 734 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
PBRM1-208ENST00000410007 BAG4O95429 457 aaKnown RBP10.55□□□□□ -0.72
PBRM1-208ENST00000410007 PDE1AP54750 535 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 GUCY1B3Q02153 619 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 BABAM1Q9NWV8 329 aa10.55□□□□□ -0.72
PBRM1-208ENST00000410007 NEO1Q92859 1461 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 VAMP4O75379 141 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 IGHDP01880 384 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 TRIM21P19474 475 aaKnown RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CYP7A1P22680 504 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 HAND2P61296 217 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 TRAF1Q13077 416 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 ZNF771Q7L3S4 317 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 TSG101Q99816 390 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 KRT23Q9C075 422 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 HDAC9Q9UKV0 1011 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 EDC4Q6P2E9 1401 aaKnown RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CFAP100Q494V2 611 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CCDC181Q5TID7 509 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 MAST1Q9Y2H9 1570 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CNNM2Q9H8M5 875 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 BTG4Q9NY30 223 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 SBNO1A3KN83 1393 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 PZPP20742 1482 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 CEP170Q5SW79 1584 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 FILIP1Q7Z7B0 1213 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
PBRM1-208ENST00000410007 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
PBRM1-208ENST00000410007 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 MTERF4Q7Z6M4 381 aaKnown RBP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 DNAI2Q9GZS0 605 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 OGFOD1Q8N543 542 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 ESR2Q92731 530 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 PHACTR3Q96KR7 559 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 PYM1Q9BRP8 204 aaKnown RBP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 NPC1L1Q9UHC9 1359 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 SDSP20132 328 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 NAA16Q6N069 864 aaPredicted RBP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 TCP11L1Q9NUJ3 509 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 EPB41L2O43491 1005 aaKnown RBP10.53□□□□□ -0.72
PBRM1-208ENST00000410007 WTAPQ15007 396 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 TTC41PQ6P2S7 1318 aa10.53□□□□□ -0.72
PBRM1-208ENST00000410007 SYCE3A1L190 88 aa10.52□□□□□ -0.72
PBRM1-208ENST00000410007 IRS4O14654 1257 aaPredicted RBP10.52□□□□□ -0.72
PBRM1-208ENST00000410007 CAMK4Q16566 473 aa10.52□□□□□ -0.72
PBRM1-208ENST00000410007 FKBP15Q5T1M5 1219 aa10.52□□□□□ -0.72
PBRM1-208ENST00000410007 SKAP1Q86WV1 359 aa10.52□□□□□ -0.72
PBRM1-208ENST00000410007 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.72
PBRM1-208ENST00000410007 TFCP2L1Q9NZI6 479 aa10.52□□□□□ -0.72
PBRM1-208ENST00000410007 STX6O43752 255 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 GJB2P29033 226 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 SCLT1Q96NL6 688 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 STX8Q9UNK0 236 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 ANAPC15P60006 121 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 NBPF14Q5TI25 921 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.73
PBRM1-208ENST00000410007 HOXB7P09629 217 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 GNAQP50148 359 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 SLC4A4Q9Y6R1 1079 aa10.52□□□□□ -0.73
PBRM1-208ENST00000410007 COL17A1Q9UMD9 1497 aaPredicted RBP10.52□□□□□ -0.73
PBRM1-208ENST00000410007 AMPD3Q01432 767 aa10.51□□□□□ -0.73
PBRM1-208ENST00000410007 SLC9C2Q5TAH2 1124 aa10.51□□□□□ -0.73
PBRM1-208ENST00000410007 CCDC112Q8NEF3 446 aa10.51□□□□□ -0.73
PBRM1-208ENST00000410007 CALML4Q96GE6 196 aa10.51□□□□□ -0.73
PBRM1-208ENST00000410007 ANKRD2Q9GZV1 360 aa10.51□□□□□ -0.73
PBRM1-208ENST00000410007 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms