RNA–Protein interactions for RNA: ENST00000409633.5

UBE2F-203, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-203ENST00000409633 PPP1R42Q7Z4L9 355 aa25.38■■□□□ 1.65
UBE2F-203ENST00000409633 SLC51AQ86UW1 340 aa25.38■■□□□ 1.65
UBE2F-203ENST00000409633 CNKSR1Q969H4 720 aa25.38■■□□□ 1.65
UBE2F-203ENST00000409633 SLX4Q8IY92 1834 aa25.37■■□□□ 1.65
UBE2F-203ENST00000409633 NFKBIEO00221 500 aa25.37■■□□□ 1.65
UBE2F-203ENST00000409633 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
UBE2F-203ENST00000409633 HSP90AB3PQ58FF7 597 aa25.37■■□□□ 1.65
UBE2F-203ENST00000409633 RNF181Q9P0P0 153 aa25.37■■□□□ 1.65
UBE2F-203ENST00000409633 IBTKQ9P2D0 1353 aaPredicted RBP25.36■■□□□ 1.65
UBE2F-203ENST00000409633 CACNA1SQ13698 1873 aa25.36■■□□□ 1.65
UBE2F-203ENST00000409633 HCLS1P14317 486 aaPredicted RBP25.35■■□□□ 1.65
UBE2F-203ENST00000409633 G2E3Q7L622 706 aa25.35■■□□□ 1.65
UBE2F-203ENST00000409633 RIC3Q7Z5B4 369 aa25.35■■□□□ 1.65
UBE2F-203ENST00000409633 RTL5Q5HYW3 569 aaPredicted RBP25.34■■□□□ 1.65
UBE2F-203ENST00000409633 ISCA1Q9BUE6 129 aa25.34■■□□□ 1.65
UBE2F-203ENST00000409633 TRMT112Q9UI30 125 aaKnown RBP25.34■■□□□ 1.65
UBE2F-203ENST00000409633 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
UBE2F-203ENST00000409633 GOLGA2Q08379 1002 aa25.33■■□□□ 1.65
UBE2F-203ENST00000409633 CRY2Q49AN0 593 aa25.33■■□□□ 1.65
UBE2F-203ENST00000409633 DIEXFQ68CQ4 756 aaKnown RBP25.33■■□□□ 1.65
UBE2F-203ENST00000409633 ANKRD36CQ5JPF3 1778 aa25.33■■□□□ 1.65
UBE2F-203ENST00000409633 MIER1Q8N108 512 aa25.32■■□□□ 1.64
UBE2F-203ENST00000409633 C7orf43Q8WVR3 580 aa25.32■■□□□ 1.64
UBE2F-203ENST00000409633 MYD88Q99836 296 aa25.32■■□□□ 1.64
UBE2F-203ENST00000409633 ZNF521Q96K83 1311 aa25.32■■□□□ 1.64
UBE2F-203ENST00000409633 VAMP4O75379 141 aa25.31■■□□□ 1.64
UBE2F-203ENST00000409633 JARID2Q92833 1246 aaPredicted RBP25.31■■□□□ 1.64
UBE2F-203ENST00000409633 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
UBE2F-203ENST00000409633 STK31Q9BXU1 1019 aa25.31■■□□□ 1.64
UBE2F-203ENST00000409633 GPBP1L1Q9HC44 474 aaPredicted RBP25.31■■□□□ 1.64
UBE2F-203ENST00000409633 SLC4A2P04920 1241 aa25.3■■□□□ 1.64
UBE2F-203ENST00000409633 FAM89AQ96GI7 184 aa25.3■■□□□ 1.64
UBE2F-203ENST00000409633 ARFGEF2Q9Y6D5 1785 aa25.29■■□□□ 1.64
UBE2F-203ENST00000409633 SLC10A5Q5PT55 438 aa25.29■■□□□ 1.64
UBE2F-203ENST00000409633 SH3TC1Q8TE82 1336 aa25.29■■□□□ 1.64
UBE2F-203ENST00000409633 LMNB1P20700 586 aa25.28■■□□□ 1.64
UBE2F-203ENST00000409633 NLRP3Q96P20 1036 aa25.28■■□□□ 1.64
UBE2F-203ENST00000409633 MAP3K2Q9Y2U5 619 aa25.28■■□□□ 1.64
UBE2F-203ENST00000409633 RIC1Q4ADV7 1423 aa25.28■■□□□ 1.64
UBE2F-203ENST00000409633 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
UBE2F-203ENST00000409633 SBF1O95248 1867 aa25.27■■□□□ 1.64
UBE2F-203ENST00000409633 PI4KAP2A4QPH2 592 aa25.26■■□□□ 1.63
UBE2F-203ENST00000409633 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
UBE2F-203ENST00000409633 HOXA10P31260 410 aaPredicted RBP25.26■■□□□ 1.63
UBE2F-203ENST00000409633 PI4KAP1Q8N8J0 262 aa25.26■■□□□ 1.63
UBE2F-203ENST00000409633 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
UBE2F-203ENST00000409633 TAOK3Q9H2K8 898 aa25.26■■□□□ 1.63
UBE2F-203ENST00000409633 CCDC93Q567U6 631 aa25.25■■□□□ 1.63
UBE2F-203ENST00000409633 METTL22Q9BUU2 404 aaPredicted RBP25.25■■□□□ 1.63
UBE2F-203ENST00000409633 DDX58O95786 925 aaKnown RBP25.24■■□□□ 1.63
UBE2F-203ENST00000409633 KSR2Q6VAB6 950 aa25.24■■□□□ 1.63
UBE2F-203ENST00000409633 CDCA7LQ96GN5 454 aa25.24■■□□□ 1.63
UBE2F-203ENST00000409633 NMRK2Q9NPI5 230 aa25.24■■□□□ 1.63
UBE2F-203ENST00000409633 ABCC4O15439 1325 aa25.23■■□□□ 1.63
UBE2F-203ENST00000409633 CHMP4AQ9BY43 222 aa25.23■■□□□ 1.63
UBE2F-203ENST00000409633 FER1L6Q2WGJ9 1857 aa25.23■■□□□ 1.63
UBE2F-203ENST00000409633 RNF123Q5XPI4 1314 aa25.22■■□□□ 1.63
UBE2F-203ENST00000409633 PPEF1O14829 653 aaPredicted RBP25.22■■□□□ 1.63
UBE2F-203ENST00000409633 FLIIQ13045 1269 aa25.22■■□□□ 1.63
UBE2F-203ENST00000409633 TRIM28Q13263 835 aaKnown RBP25.22■■□□□ 1.63
UBE2F-203ENST00000409633 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
UBE2F-203ENST00000409633 ZNF277Q9NRM2 450 aaPredicted RBP25.22■■□□□ 1.63
UBE2F-203ENST00000409633 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
UBE2F-203ENST00000409633 CWF19L2Q2TBE0 894 aaKnown RBP25.21■■□□□ 1.63
UBE2F-203ENST00000409633 SOGA3Q5TF21 947 aa25.21■■□□□ 1.63
UBE2F-203ENST00000409633 LAMB2P55268 1798 aa25.21■■□□□ 1.63
UBE2F-203ENST00000409633 IRS4O14654 1257 aaPredicted RBP25.2■■□□□ 1.62
UBE2F-203ENST00000409633 KIF3CO14782 793 aa25.2■■□□□ 1.62
UBE2F-203ENST00000409633 CCDC88AQ3V6T2 1871 aa25.19■■□□□ 1.62
UBE2F-203ENST00000409633 LTBP3Q9NS15 1303 aa25.19■■□□□ 1.62
UBE2F-203ENST00000409633 FKBP4Q02790 459 aaKnown RBP eCLIP25.19■■□□□ 1.62
UBE2F-203ENST00000409633 FKBP5Q13451 457 aaPredicted RBP25.19■■□□□ 1.62
UBE2F-203ENST00000409633 CWC25Q9NXE8 425 aaPredicted RBP25.19■■□□□ 1.62
UBE2F-203ENST00000409633 DDX60Q8IY21 1712 aaKnown RBP25.19■■□□□ 1.62
UBE2F-203ENST00000409633 C1QTNF8P60827 252 aa25.18■■□□□ 1.62
UBE2F-203ENST00000409633 ZBTB38Q8NAP3 1195 aaPredicted RBP25.18■■□□□ 1.62
UBE2F-203ENST00000409633 CCDC191Q8NCU4 936 aa25.18■■□□□ 1.62
UBE2F-203ENST00000409633 COL4A1P02462 1669 aa25.17■■□□□ 1.62
UBE2F-203ENST00000409633 F6X3S4 739 aa25.17■■□□□ 1.62
UBE2F-203ENST00000409633 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
UBE2F-203ENST00000409633 CCDC85AQ96PX6 553 aaPredicted RBP25.17■■□□□ 1.62
UBE2F-203ENST00000409633 SNED1Q8TER0 1413 aa25.17■■□□□ 1.62
UBE2F-203ENST00000409633 E9PSI1 815 aa25.16■■□□□ 1.62
UBE2F-203ENST00000409633 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
UBE2F-203ENST00000409633 TIAM2Q8IVF5 1701 aa25.16■■□□□ 1.62
UBE2F-203ENST00000409633 RTKN2Q8IZC4 609 aa25.16■■□□□ 1.62
UBE2F-203ENST00000409633 RRAGCQ9HB90 399 aa25.16■■□□□ 1.62
UBE2F-203ENST00000409633 TAF1P21675 1872 aa25.15■■□□□ 1.62
UBE2F-203ENST00000409633 PCCAP05165 728 aaPredicted RBP25.15■■□□□ 1.62
UBE2F-203ENST00000409633 NEURL1BA8MQ27 555 aa25.14■■□□□ 1.62
UBE2F-203ENST00000409633 NEXNQ0ZGT2 675 aa25.14■■□□□ 1.62
UBE2F-203ENST00000409633 GRAPQ13588 217 aa25.14■■□□□ 1.62
UBE2F-203ENST00000409633 GRAPLQ8TC17 118 aaPredicted RBP25.14■■□□□ 1.62
UBE2F-203ENST00000409633 DNAAF4Q8WXU2 420 aa25.14■■□□□ 1.62
UBE2F-203ENST00000409633 CELF1Q92879 486 aaKnown RBP25.14■■□□□ 1.62
UBE2F-203ENST00000409633 SF3B3Q15393 1217 aaKnown RBP25.13■■□□□ 1.61
UBE2F-203ENST00000409633 SEC31BQ9NQW1 1179 aa25.13■■□□□ 1.61
UBE2F-203ENST00000409633 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
UBE2F-203ENST00000409633 GLTPD2A6NH11 291 aa25.12■■□□□ 1.61
UBE2F-203ENST00000409633 KDM2BQ8NHM5 1336 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms