RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 LTBP4Q8N2S1 1624 aa12.13□□□□□ -0.47
CUL1-202ENST00000409469 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 LMBR1LQ6UX01 489 aa12.13□□□□□ -0.47
CUL1-202ENST00000409469 CWC27Q6UX04 472 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
CUL1-202ENST00000409469 EDC3Q96F86 508 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
CUL1-202ENST00000409469 TUBGCP6Q96RT7 1819 aa12.13□□□□□ -0.47
CUL1-202ENST00000409469 EXOC5O00471 708 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 CNPY4Q8N129 248 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 REC8O95072 547 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 UBR2Q8IWV8 1755 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 CHGBP05060 677 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 ZNF594Q96JF6 807 aaPredicted RBP12.12□□□□□ -0.47
CUL1-202ENST00000409469 BOLA2Q9H3K6 86 aa12.12□□□□□ -0.47
CUL1-202ENST00000409469 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
CUL1-202ENST00000409469 LAMB4A4D0S4 1761 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
CUL1-202ENST00000409469 GPTP24298 496 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 CASP7P55210 303 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
CUL1-202ENST00000409469 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 TFCP2Q12800 502 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 SNX21Q969T3 373 aa12.11□□□□□ -0.47
CUL1-202ENST00000409469 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
CUL1-202ENST00000409469 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
CUL1-202ENST00000409469 ECHDC1Q9NTX5 307 aa12.1□□□□□ -0.47
CUL1-202ENST00000409469 HLFQ16534 295 aa12.1□□□□□ -0.47
CUL1-202ENST00000409469 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
CUL1-202ENST00000409469 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
CUL1-202ENST00000409469 ZBTB1Q9Y2K1 713 aa12.1□□□□□ -0.47
CUL1-202ENST00000409469 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
CUL1-202ENST00000409469 PAPPAQ13219 1627 aa12.1□□□□□ -0.47
CUL1-202ENST00000409469 AHDC1Q5TGY3 1603 aaPredicted RBP12.1□□□□□ -0.47
CUL1-202ENST00000409469 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 DTNBO60941 627 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 KCNQ4P56696 695 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 PHLPP1O60346 1717 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 FOXO4P98177 505 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
CUL1-202ENST00000409469 ITGB4P16144 1822 aa12.09□□□□□ -0.47
CUL1-202ENST00000409469 DDB1Q16531 1140 aa12.08□□□□□ -0.47
CUL1-202ENST00000409469 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.47
CUL1-202ENST00000409469 GLRX3O76003 335 aaKnown RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 NEK4P51957 841 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 RABEP1Q15276 862 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 BCL9O00512 1426 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 KCNQ2O43526 872 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 LRRC24Q50LG9 513 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 MARCH10Q8NA82 808 aaPredicted RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 CHMP5Q9NZZ3 219 aa12.08□□□□□ -0.48
CUL1-202ENST00000409469 DBNLQ9UJU6 430 aaKnown RBP12.08□□□□□ -0.48
CUL1-202ENST00000409469 AOX1Q06278 1338 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 GOLGB1Q14789 3259 aaKnown RBP12.07□□□□□ -0.48
CUL1-202ENST00000409469 FAM177BA6PVY3 158 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 H7C1W4 665 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 CPA1P15085 419 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 PKP1Q13835 747 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
CUL1-202ENST00000409469 ZNF526Q8TF50 670 aaPredicted RBP12.07□□□□□ -0.48
CUL1-202ENST00000409469 DBNDD2Q9BQY9 259 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 AK9Q5TCS8 1911 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 PLCH1Q4KWH8 1693 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
CUL1-202ENST00000409469 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
CUL1-202ENST00000409469 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 SGSM2O43147 1006 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 DDIT3P35638 169 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 STARD3NLO95772 234 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 CYP19A1P11511 503 aaPredicted RBP12.06□□□□□ -0.48
CUL1-202ENST00000409469 TIMM10P62072 90 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 PTH1RQ03431 593 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 PTF1AQ7RTS3 328 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
CUL1-202ENST00000409469 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
CUL1-202ENST00000409469 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
CUL1-202ENST00000409469 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 NEUROD6Q96NK8 337 aa12.05□□□□□ -0.48
CUL1-202ENST00000409469 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms