RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
SHANK2-203ENST00000409161 SLU7O95391 586 aaKnown RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 MPHOSPH6Q99547 160 aaKnown RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 CUL7Q14999 1698 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 GMNNO75496 209 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 WDHD1O75717 1129 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 SH2D4BQ5SQS7 431 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 CLGNO14967 610 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 UBASH3AP57075 661 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 CACNA2D3Q8IZS8 1091 aa13.86□□□□□ -0.19
SHANK2-203ENST00000409161 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
SHANK2-203ENST00000409161 KIF14Q15058 1648 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 ZNF530Q6P9A1 599 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-203ENST00000409161 STMN2Q93045 179 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-203ENST00000409161 STARD3NLO95772 234 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 RASSF4Q9H2L5 321 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 FGD5Q6ZNL6 1462 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 ZSCAN29Q8IWY8 852 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-203ENST00000409161 FAM114A2Q9NRY5 505 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 CEP57Q86XR8 500 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 CKAP2LQ8IYA6 745 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 HDXQ7Z353 690 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 ZNF213O14771 459 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 BMP2KLQ5H9B9 411 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 SULT6B1Q6IMI4 303 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 ATRIPQ8WXE1 791 aa13.85□□□□□ -0.19
SHANK2-203ENST00000409161 AKR1B10O60218 316 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 VAV2P52735 878 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 ZSCAN23Q3MJ62 389 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 GBP1P32455 592 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 PRPF40BQ6NWY9 871 aaKnown RBP13.84□□□□□ -0.19
SHANK2-203ENST00000409161 SYCP3Q8IZU3 236 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 CNGA1P29973 690 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 UBA7P41226 1012 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 FAM200AQ8TCP9 573 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 DNA2P51530 1060 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 TRAF1Q13077 416 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 MCM6Q14566 821 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 PPFIBP2Q8ND30 876 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 CCDC114Q96M63 670 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 EPRSP07814 1512 aaKnown RBP13.84□□□□□ -0.19
SHANK2-203ENST00000409161 ODF2LQ9ULJ1 636 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 CIB2O75838 187 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 FAM76AQ8TAV0 307 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 FAM184BQ9ULE4 1060 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 N4BP3O15049 544 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
SHANK2-203ENST00000409161 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
SHANK2-203ENST00000409161 MTRF1LQ9UGC7 380 aaKnown RBP13.84□□□□□ -0.19
SHANK2-203ENST00000409161 A0A1B0GUL7 405 aa13.83□□□□□ -0.19
SHANK2-203ENST00000409161 IFIT1P09914 478 aaKnown RBP13.83□□□□□ -0.19
SHANK2-203ENST00000409161 SF3B2Q13435 895 aaKnown RBP13.83□□□□□ -0.19
SHANK2-203ENST00000409161 MICALL1Q8N3F8 863 aa13.83□□□□□ -0.19
SHANK2-203ENST00000409161 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
SHANK2-203ENST00000409161 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 LMNTD2Q8IXW0 634 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 TMEM57Q8N5G2 664 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
SHANK2-203ENST00000409161 SYNCQ9H7C4 482 aa13.83□□□□□ -0.2
SHANK2-203ENST00000409161 MYL6BP14649 208 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SYKP43405 635 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHANK2-203ENST00000409161 ARID4AP29374 1257 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SLFN5Q08AF3 891 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 KIF5AQ12840 1032 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 NOLC1Q14978 699 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHANK2-203ENST00000409161 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SKILP12757 684 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 TRIM47Q96LD4 638 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 VCXQ9H320 206 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 OGFRQ9NZT2 677 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-203ENST00000409161 TCERG1LQ5VWI1 586 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 C10orf67Q8IYJ2 551 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 TBCAO75347 108 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms