RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 ZNF592Q92610 1267 aa16.52■□□□□ 0.24
ITGA6-202ENST00000409080 CCP110O43303 1012 aa16.52■□□□□ 0.24
ITGA6-202ENST00000409080 CDR1P51861 262 aa16.52■□□□□ 0.24
ITGA6-202ENST00000409080 NAA16Q6N069 864 aaPredicted RBP16.52■□□□□ 0.24
ITGA6-202ENST00000409080 SNRKQ9NRH2 765 aa16.52■□□□□ 0.23
ITGA6-202ENST00000409080 CCDC87Q9NVE4 849 aa16.52■□□□□ 0.23
ITGA6-202ENST00000409080 ARHGEF5Q12774 1597 aa16.52■□□□□ 0.23
ITGA6-202ENST00000409080 APBA3O96018 575 aa16.51■□□□□ 0.23
ITGA6-202ENST00000409080 HMG20BQ9P0W2 317 aa16.51■□□□□ 0.23
ITGA6-202ENST00000409080 TRPC5Q9UL62 973 aaPredicted RBP16.51■□□□□ 0.23
ITGA6-202ENST00000409080 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
ITGA6-202ENST00000409080 CYP7A1P22680 504 aa16.51■□□□□ 0.23
ITGA6-202ENST00000409080 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
ITGA6-202ENST00000409080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.51■□□□□ 0.23
ITGA6-202ENST00000409080 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 KRT23Q9C075 422 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 PRPF40AO75400 957 aaKnown RBP16.5■□□□□ 0.23
ITGA6-202ENST00000409080 KIF20AO95235 890 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 NLRP5P59047 1200 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
ITGA6-202ENST00000409080 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
ITGA6-202ENST00000409080 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 C8orf76Q96K31 380 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
ITGA6-202ENST00000409080 HOXB7P09629 217 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
ITGA6-202ENST00000409080 KDM5DQ9BY66 1539 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 H0YIN7 160 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 POTEJP0CG39 1038 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TSPY3P0CV98 308 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TSPY8P0CW00 308 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TMEM94Q12767 1356 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 TSPY26PQ9H489 355 aa16.49■□□□□ 0.23
ITGA6-202ENST00000409080 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
ITGA6-202ENST00000409080 CBFA2T2O43439 604 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 GNAT2P19087 354 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 PDE6BP35913 854 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
ITGA6-202ENST00000409080 DDX11Q96FC9 970 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 VEZTQ9HBM0 779 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 ABCA8O94911 1581 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 F8W031 263 aaPredicted RBP16.48■□□□□ 0.23
ITGA6-202ENST00000409080 SERPINC1P01008 464 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 PPFIBP1Q86W92 1011 aa16.48■□□□□ 0.23
ITGA6-202ENST00000409080 LTKP29376 864 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 GNAQP50148 359 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 ESR2Q92731 530 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 TESK2Q96S53 571 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
ITGA6-202ENST00000409080 EIF6P56537 245 aaKnown RBP16.46■□□□□ 0.23
ITGA6-202ENST00000409080 PZPP20742 1482 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 MNS1Q8NEH6 495 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 DEF6Q9H4E7 631 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 CAGE1Q8TC20 777 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 MAST3O60307 1309 aa16.46■□□□□ 0.23
ITGA6-202ENST00000409080 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.22
ITGA6-202ENST00000409080 RUFY1Q96T51 708 aa16.46■□□□□ 0.22
ITGA6-202ENST00000409080 SLC4A4Q9Y6R1 1079 aa16.46■□□□□ 0.22
ITGA6-202ENST00000409080 CAVIN1Q6NZI2 390 aaKnown RBP16.45■□□□□ 0.22
ITGA6-202ENST00000409080 TSG101Q99816 390 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 CHD1O14646 1710 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 IBSPP21815 317 aaPredicted RBP16.45■□□□□ 0.22
ITGA6-202ENST00000409080 SLC52A2Q9HAB3 445 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 LDHBP07195 334 aaKnown RBP16.45■□□□□ 0.22
ITGA6-202ENST00000409080 ACBD3Q9H3P7 528 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 STX8Q9UNK0 236 aa16.45■□□□□ 0.22
ITGA6-202ENST00000409080 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
ITGA6-202ENST00000409080 MRPL50Q8N5N7 158 aaKnown RBP16.44■□□□□ 0.22
ITGA6-202ENST00000409080 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 GRM1Q13255 1194 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
ITGA6-202ENST00000409080 MAGEB6P1A0A0J9YX57 407 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 STXBP4Q6ZWJ1 553 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
ITGA6-202ENST00000409080 MCM5P33992 734 aa16.43■□□□□ 0.22
ITGA6-202ENST00000409080 PICALMQ13492 652 aa16.43■□□□□ 0.22
ITGA6-202ENST00000409080 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
ITGA6-202ENST00000409080 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
ITGA6-202ENST00000409080 FGFR1OPO95684 399 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms