RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
SNORD88B-201ENST00000408454 ANP32CO43423 234 aa16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 EIF6P56537 245 aaKnown RBP16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 GOLGA2Q08379 1002 aa16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 SH3TC1Q8TE82 1336 aa16.63■□□□□ 0.25
SNORD88B-201ENST00000408454 BBOX1O75936 387 aa16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 SLC10A5Q5PT55 438 aa16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 COPS6Q7L5N1 327 aa16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 PLBD2Q8NHP8 589 aa16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
SNORD88B-201ENST00000408454 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 NTSR2O95665 410 aa16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 LMOD1P29536 600 aaPredicted RBP16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 TCIRG1Q13488 830 aa16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 WDR90Q96KV7 1748 aa16.61■□□□□ 0.25
SNORD88B-201ENST00000408454 AIMP1Q12904 312 aaKnown RBP16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 SUSD4Q5VX71 490 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 ANKRD13DQ6ZTN6 518 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 NUTM1Q86Y26 1132 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 NUP98P52948 1817 aa16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 DICER1Q9UPY3 1922 aaKnown RBP16.6■□□□□ 0.25
SNORD88B-201ENST00000408454 GPC2Q8N158 579 aa16.59■□□□□ 0.25
SNORD88B-201ENST00000408454 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
SNORD88B-201ENST00000408454 PDIA6Q15084 440 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 HACL1Q9UJ83 578 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 UBN2Q6ZU65 1347 aa16.58■□□□□ 0.24
SNORD88B-201ENST00000408454 ABCC12Q96J65 1359 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 APAF1O14727 1248 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 RIC3Q7Z5B4 369 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 ATP6V0A2Q9Y487 856 aa16.57■□□□□ 0.24
SNORD88B-201ENST00000408454 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
SNORD88B-201ENST00000408454 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
SNORD88B-201ENST00000408454 TRIM28Q13263 835 aaKnown RBP16.56■□□□□ 0.24
SNORD88B-201ENST00000408454 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
SNORD88B-201ENST00000408454 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 SP8Q8IXZ3 490 aa16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
SNORD88B-201ENST00000408454 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 SCN4AP35499 1836 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 ANKRD36CQ5JPF3 1778 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 IL16Q14005 1332 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 FZD9O00144 591 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
SNORD88B-201ENST00000408454 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 PPIP5K2O43314 1243 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 ZNF853P0CG23 659 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 GRAPQ13588 217 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 TNIP1Q15025 636 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 MPNDQ8N594 471 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 CCDC191Q8NCU4 936 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 EYA3Q99504 573 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
SNORD88B-201ENST00000408454 EPHX2P34913 555 aa16.52■□□□□ 0.24
SNORD88B-201ENST00000408454 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
SNORD88B-201ENST00000408454 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
SNORD88B-201ENST00000408454 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
SNORD88B-201ENST00000408454 PRELPP51888 382 aa16.51■□□□□ 0.23
SNORD88B-201ENST00000408454 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
SNORD88B-201ENST00000408454 ABCC4O15439 1325 aa16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 ANXA1P04083 346 aa16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 SF3B3Q15393 1217 aaKnown RBP16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 EAPPQ56P03 285 aaPredicted RBP16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 ZBTB38Q8NAP3 1195 aaPredicted RBP16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 ISCA1Q9BUE6 129 aa16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 RTFDC1Q9BY42 306 aaPredicted RBP16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
SNORD88B-201ENST00000408454 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
SNORD88B-201ENST00000408454 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
SNORD88B-201ENST00000408454 CWC25Q9NXE8 425 aaPredicted RBP16.49■□□□□ 0.23
SNORD88B-201ENST00000408454 G3V3G9 751 aa16.48■□□□□ 0.23
SNORD88B-201ENST00000408454 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
SNORD88B-201ENST00000408454 DCAF8Q5TAQ9 597 aa16.48■□□□□ 0.23
SNORD88B-201ENST00000408454 DNAJC5GQ8N7S2 189 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms