RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 TCERG1LQ5VWI1 586 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 CRNKL1Q9BZJ0 848 aaKnown RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 IDEP14735 1019 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 SNW1Q13573 536 aaKnown RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 SYCP3Q8IZU3 236 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 B4DLN1 442 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 KIF4AO95239 1232 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 MRPL12P52815 198 aaKnown RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 NEK1Q96PY6 1258 aa12.32□□□□□ -0.44
LTBP1-204ENST00000407925 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
LTBP1-204ENST00000407925 PRC1O43663 620 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 ZNF165P49910 485 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 CCDC85AQ96PX6 553 aaPredicted RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 ERICH4A6NGS2 130 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 FLIIQ13045 1269 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 UBE4AQ14139 1066 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 ARHGAP45Q92619 1136 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 RASAL2Q9UJF2 1139 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 RNF187Q5TA31 235 aaPredicted RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 MCM10Q7L590 875 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 EXOC1Q9NV70 894 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 TUBBP07437 444 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 NOP2P46087 812 aaKnown RBP12.31□□□□□ -0.44
LTBP1-204ENST00000407925 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
LTBP1-204ENST00000407925 EXOC5O00471 708 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 AKR1B10O60218 316 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 MYO1BO43795 1136 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.3□□□□□ -0.44
LTBP1-204ENST00000407925 V9GYY5 206 aaPredicted RBP12.3□□□□□ -0.44
LTBP1-204ENST00000407925 HSF2BPO75031 334 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 ATP2A1O14983 1001 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 KLHL40Q2TBA0 621 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 TTC14Q96N46 770 aa12.3□□□□□ -0.44
LTBP1-204ENST00000407925 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
LTBP1-204ENST00000407925 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
LTBP1-204ENST00000407925 N4BP3O15049 544 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 GJB2P29033 226 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 ANKRD24Q8TF21 1146 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
LTBP1-204ENST00000407925 KRT13P13646 458 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 SPAG5Q96R06 1193 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 MAATS1Q7Z4T9 603 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 KIAA1524Q8TCG1 905 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 USP25Q9UHP3 1055 aa12.29□□□□□ -0.44
LTBP1-204ENST00000407925 DYNC1I1O14576 645 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 TNPO1Q92973 898 aaKnown RBP12.28□□□□□ -0.44
LTBP1-204ENST00000407925 CPLX3Q8WVH0 158 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
LTBP1-204ENST00000407925 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
LTBP1-204ENST00000407925 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 ESR2Q92731 530 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 PRPF4BQ13523 1007 aaKnown RBP12.28□□□□□ -0.44
LTBP1-204ENST00000407925 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
LTBP1-204ENST00000407925 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 JADE2Q9NQC1 790 aa12.28□□□□□ -0.44
LTBP1-204ENST00000407925 PSMA7O14818 248 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 SMARCA5O60264 1052 aaPredicted RBP12.27□□□□□ -0.44
LTBP1-204ENST00000407925 OPA1O60313 960 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 CALM1P0DP23 149 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 CALM2P0DP24 149 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 CALM3P0DP25 149 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 CKAP2LQ8IYA6 745 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 FBF1Q8TES7 1133 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 DMRT2Q9Y5R5 561 aa12.27□□□□□ -0.44
LTBP1-204ENST00000407925 IVLP07476 585 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 SNRPA1P09661 255 aaKnown RBP12.27□□□□□ -0.45
LTBP1-204ENST00000407925 SYKP43405 635 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 GUCY1B3Q02153 619 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 WTAPQ15007 396 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 MSANTD4Q8NCY6 345 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 HSPA4P34932 840 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 LMAN1P49257 510 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 GNG11P61952 73 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 IMPG2Q9BZV3 1241 aa12.27□□□□□ -0.45
LTBP1-204ENST00000407925 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
LTBP1-204ENST00000407925 CTAGE15A4D2H0 777 aa12.26□□□□□ -0.45
LTBP1-204ENST00000407925 ADCY5O95622 1261 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms