RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 MYD88Q99836 296 aa21.4■■□□□ 1.02
NR1H3-204ENST00000407404 METTL22Q9BUU2 404 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-204ENST00000407404 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
NR1H3-204ENST00000407404 RNF123Q5XPI4 1314 aa21.4■■□□□ 1.02
NR1H3-204ENST00000407404 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
NR1H3-204ENST00000407404 COL11A2P13942 1736 aaPredicted RBP21.39■■□□□ 1.02
NR1H3-204ENST00000407404 KLRG2A4D1S0 409 aaPredicted RBP21.39■■□□□ 1.01
NR1H3-204ENST00000407404 PI4KAP2A4QPH2 592 aa21.39■■□□□ 1.01
NR1H3-204ENST00000407404 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
NR1H3-204ENST00000407404 TTLL6Q8N841 843 aa21.39■■□□□ 1.01
NR1H3-204ENST00000407404 PI4KAP1Q8N8J0 262 aa21.39■■□□□ 1.01
NR1H3-204ENST00000407404 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
NR1H3-204ENST00000407404 SRGNP10124 158 aa21.38■■□□□ 1.01
NR1H3-204ENST00000407404 ADCY9O60503 1353 aa21.38■■□□□ 1.01
NR1H3-204ENST00000407404 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
NR1H3-204ENST00000407404 FKBP5Q13451 457 aaPredicted RBP21.37■■□□□ 1.01
NR1H3-204ENST00000407404 SLC10A5Q5PT55 438 aa21.37■■□□□ 1.01
NR1H3-204ENST00000407404 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
NR1H3-204ENST00000407404 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
NR1H3-204ENST00000407404 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
NR1H3-204ENST00000407404 ARFGEF1Q9Y6D6 1849 aa21.37■■□□□ 1.01
NR1H3-204ENST00000407404 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
NR1H3-204ENST00000407404 NPR1P16066 1061 aa21.36■■□□□ 1.01
NR1H3-204ENST00000407404 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
NR1H3-204ENST00000407404 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
NR1H3-204ENST00000407404 SH3TC1Q8TE82 1336 aa21.36■■□□□ 1.01
NR1H3-204ENST00000407404 CT47B1P0C2W7 299 aaPredicted RBP21.35■■□□□ 1.01
NR1H3-204ENST00000407404 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
NR1H3-204ENST00000407404 NLRP3Q96P20 1036 aa21.34■■□□□ 1.01
NR1H3-204ENST00000407404 CHD4Q14839 1912 aa21.34■■□□□ 1.01
NR1H3-204ENST00000407404 ZBED9Q6R2W3 1325 aa21.33■■□□□ 1.01
NR1H3-204ENST00000407404 CRY2Q49AN0 593 aa21.33■■□□□ 1.01
NR1H3-204ENST00000407404 ARHGAP27Q6ZUM4 889 aa21.33■■□□□ 1.01
NR1H3-204ENST00000407404 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
NR1H3-204ENST00000407404 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
NR1H3-204ENST00000407404 HCLS1P14317 486 aaPredicted RBP21.32■■□□□ 1
NR1H3-204ENST00000407404 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
NR1H3-204ENST00000407404 DNAAF4Q8WXU2 420 aa21.32■■□□□ 1
NR1H3-204ENST00000407404 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
NR1H3-204ENST00000407404 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
NR1H3-204ENST00000407404 FAM89AQ96GI7 184 aa21.32■■□□□ 1
NR1H3-204ENST00000407404 ALDH1B1P30837 517 aa21.31■■□□□ 1
NR1H3-204ENST00000407404 ALDH1L2Q3SY69 923 aa21.31■■□□□ 1
NR1H3-204ENST00000407404 ZBTB38Q8NAP3 1195 aaPredicted RBP21.31■■□□□ 1
NR1H3-204ENST00000407404 CACNA1SQ13698 1873 aa21.31■■□□□ 1
NR1H3-204ENST00000407404 IGKV5-2P06315 115 aa21.3■■□□□ 1
NR1H3-204ENST00000407404 RTL5Q5HYW3 569 aaPredicted RBP21.3■■□□□ 1
NR1H3-204ENST00000407404 PRPF40BQ6NWY9 871 aaKnown RBP21.3■■□□□ 1
NR1H3-204ENST00000407404 C3orf67Q6ZVT6 689 aa21.3■■□□□ 1
NR1H3-204ENST00000407404 PCCAP05165 728 aaPredicted RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 YY1P25490 414 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 CWF19L2Q2TBE0 894 aaKnown RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 RBM17Q96I25 401 aaKnown RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 NEURL1BA8MQ27 555 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 F6X3S4 739 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 C21orf2O43822 256 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 LINS1Q8NG48 757 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 BCL2L13Q9BXK5 485 aa21.29■■□□□ 1
NR1H3-204ENST00000407404 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
NR1H3-204ENST00000407404 SLX4Q8IY92 1834 aa21.28■■□□□ 1
NR1H3-204ENST00000407404 LAMB2P55268 1798 aa21.28■■□□□ 1
NR1H3-204ENST00000407404 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
NR1H3-204ENST00000407404 CRAMP1Q96RY5 1269 aa21.28■■□□□ 1
NR1H3-204ENST00000407404 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
NR1H3-204ENST00000407404 PTPRCP08575 1304 aa21.27■■□□□ 1
NR1H3-204ENST00000407404 SOGA3Q5TF21 947 aa21.26■□□□□ 0.99
NR1H3-204ENST00000407404 JARID2Q92833 1246 aaPredicted RBP21.26■□□□□ 0.99
NR1H3-204ENST00000407404 GCKRQ14397 625 aa21.25■□□□□ 0.99
NR1H3-204ENST00000407404 BEND3Q5T5X7 828 aa21.25■□□□□ 0.99
NR1H3-204ENST00000407404 CDHR2Q9BYE9 1310 aa21.24■□□□□ 0.99
NR1H3-204ENST00000407404 RARSP54136 660 aaKnown RBP21.24■□□□□ 0.99
NR1H3-204ENST00000407404 SF3B3Q15393 1217 aaKnown RBP21.24■□□□□ 0.99
NR1H3-204ENST00000407404 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
NR1H3-204ENST00000407404 DDX46Q7L014 1031 aaKnown RBP21.24■□□□□ 0.99
NR1H3-204ENST00000407404 C7orf43Q8WVR3 580 aa21.24■□□□□ 0.99
NR1H3-204ENST00000407404 H7C1W4 665 aa21.23■□□□□ 0.99
NR1H3-204ENST00000407404 PDE8AO60658 829 aa21.23■□□□□ 0.99
NR1H3-204ENST00000407404 ABCC4O15439 1325 aa21.22■□□□□ 0.99
NR1H3-204ENST00000407404 BRPF1P55201 1214 aaPredicted RBP21.22■□□□□ 0.99
NR1H3-204ENST00000407404 CCDC93Q567U6 631 aa21.22■□□□□ 0.99
NR1H3-204ENST00000407404 UBE3BQ7Z3V4 1068 aa21.22■□□□□ 0.99
NR1H3-204ENST00000407404 PPEF1O14829 653 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-204ENST00000407404 ALDH1L1O75891 902 aa21.21■□□□□ 0.99
NR1H3-204ENST00000407404 RASSF7Q02833 373 aa21.21■□□□□ 0.99
NR1H3-204ENST00000407404 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
NR1H3-204ENST00000407404 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
NR1H3-204ENST00000407404 NFKBIEO00221 500 aa21.2■□□□□ 0.98
NR1H3-204ENST00000407404 BBOX1O75936 387 aa21.2■□□□□ 0.98
NR1H3-204ENST00000407404 NOB1Q9ULX3 412 aaKnown RBP21.2■□□□□ 0.98
NR1H3-204ENST00000407404 GRAPQ13588 217 aa21.19■□□□□ 0.98
NR1H3-204ENST00000407404 C9orf131Q5VYM1 1079 aa21.19■□□□□ 0.98
NR1H3-204ENST00000407404 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
NR1H3-204ENST00000407404 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
NR1H3-204ENST00000407404 RTKN2Q8IZC4 609 aa21.19■□□□□ 0.98
NR1H3-204ENST00000407404 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
NR1H3-204ENST00000407404 SBF1O95248 1867 aa21.18■□□□□ 0.98
NR1H3-204ENST00000407404 CASP7P55210 303 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms