RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 PRR29P0C7W0 189 aa19.53■□□□□ 0.72
CDK11B-204ENST00000407249 HSPA4P34932 840 aa19.53■□□□□ 0.72
CDK11B-204ENST00000407249 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
CDK11B-204ENST00000407249 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
CDK11B-204ENST00000407249 HDGFL1Q5TGJ6 251 aa19.53■□□□□ 0.72
CDK11B-204ENST00000407249 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
CDK11B-204ENST00000407249 TMEM132AQ24JP5 1023 aa19.52■□□□□ 0.72
CDK11B-204ENST00000407249 AOX1Q06278 1338 aa19.52■□□□□ 0.72
CDK11B-204ENST00000407249 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
CDK11B-204ENST00000407249 SIPA1L3O60292 1781 aaPredicted RBP19.52■□□□□ 0.71
CDK11B-204ENST00000407249 AXIN2Q9Y2T1 843 aa19.51■□□□□ 0.71
CDK11B-204ENST00000407249 CPDO75976 1380 aa19.51■□□□□ 0.71
CDK11B-204ENST00000407249 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
CDK11B-204ENST00000407249 LGR6Q9HBX8 967 aa19.51■□□□□ 0.71
CDK11B-204ENST00000407249 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
CDK11B-204ENST00000407249 RPAP1Q9BWH6 1393 aaPredicted RBP19.5■□□□□ 0.71
CDK11B-204ENST00000407249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
CDK11B-204ENST00000407249 CCDC183Q5T5S1 534 aa19.5■□□□□ 0.71
CDK11B-204ENST00000407249 USP25Q9UHP3 1055 aa19.5■□□□□ 0.71
CDK11B-204ENST00000407249 LRRFIP2Q9Y608 721 aaKnown RBP19.5■□□□□ 0.71
CDK11B-204ENST00000407249 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 NBPF20Q3BBV1 942 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 PIBF1Q8WXW3 757 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 HSPA2P54652 639 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 CBX1P83916 185 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 MYRIPQ8NFW9 859 aa19.49■□□□□ 0.71
CDK11B-204ENST00000407249 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
CDK11B-204ENST00000407249 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
CDK11B-204ENST00000407249 CNPY2Q9Y2B0 182 aa19.48■□□□□ 0.71
CDK11B-204ENST00000407249 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 IL1RAPL2Q9NP60 686 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 ADCY5O95622 1261 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 ZSCAN22P10073 491 aaPredicted RBP19.47■□□□□ 0.71
CDK11B-204ENST00000407249 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
CDK11B-204ENST00000407249 NOLC1Q14978 699 aaKnown RBP eCLIP19.47■□□□□ 0.71
CDK11B-204ENST00000407249 MPRIPQ6WCQ1 1025 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 MPNDQ8N594 471 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 TTC14Q96N46 770 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 RAD50Q92878 1312 aa19.47■□□□□ 0.71
CDK11B-204ENST00000407249 HEG1Q9ULI3 1381 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 UBE2HP62256 183 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 ZBTB9Q96C00 473 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 PRIMPOLQ96LW4 560 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
CDK11B-204ENST00000407249 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
CDK11B-204ENST00000407249 SGSM2O43147 1006 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 NUTM1Q86Y26 1132 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 SNX14Q9Y5W7 946 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 TCHHQ07283 1943 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 BANK1Q8NDB2 785 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 SCN11AQ9UI33 1791 aa19.45■□□□□ 0.7
CDK11B-204ENST00000407249 STX6O43752 255 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 SYT1P21579 422 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 OS9Q13438 667 aaPredicted RBP19.44■□□□□ 0.7
CDK11B-204ENST00000407249 PI4K2BQ8TCG2 481 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 TTC12Q9H892 705 aaPredicted RBP19.44■□□□□ 0.7
CDK11B-204ENST00000407249 LOC102724159A0A0B4J2E5 919 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
CDK11B-204ENST00000407249 PWP2Q15269 919 aaKnown RBP19.44■□□□□ 0.7
CDK11B-204ENST00000407249 TSPYL1Q9H0U9 437 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
CDK11B-204ENST00000407249 AK2P54819 239 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 HMGN5P82970 282 aaKnown RBP19.43■□□□□ 0.7
CDK11B-204ENST00000407249 LIMCH1Q9UPQ0 1083 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 SH3BP1Q9Y3L3 701 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 RAB11FIP3O75154 756 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 RUFY3Q7L099 469 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 PSMD1Q99460 953 aa19.43■□□□□ 0.7
CDK11B-204ENST00000407249 LSG1Q9H089 658 aaKnown RBP19.43■□□□□ 0.7
CDK11B-204ENST00000407249 DBF4Q9UBU7 674 aaPredicted RBP19.43■□□□□ 0.7
CDK11B-204ENST00000407249 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.43■□□□□ 0.7
CDK11B-204ENST00000407249 KDM4AO75164 1064 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
CDK11B-204ENST00000407249 GTF2F1P35269 517 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDK11B-204ENST00000407249 RASEFQ8IZ41 740 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 TRIM34Q9BYJ4 488 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 EFCC1Q9HA90 598 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 SPTLC3Q9NUV7 552 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 MRC1P22897 1456 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 F13A1P00488 732 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 KCNA4P22459 653 aa19.42■□□□□ 0.7
CDK11B-204ENST00000407249 DDX17Q92841 729 aaKnown RBP19.42■□□□□ 0.7
CDK11B-204ENST00000407249 TULP2O00295 520 aa19.41■□□□□ 0.7
CDK11B-204ENST00000407249 FUCA2Q9BTY2 467 aa19.41■□□□□ 0.7
CDK11B-204ENST00000407249 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
CDK11B-204ENST00000407249 SURF6O75683 361 aaKnown RBP19.41■□□□□ 0.7
CDK11B-204ENST00000407249 RHPN1Q8TCX5 695 aa19.41■□□□□ 0.7
CDK11B-204ENST00000407249 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 SETQ01105 290 aaPredicted RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 POLA2Q14181 598 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 MEGF6O75095 1541 aa19.4■□□□□ 0.7
CDK11B-204ENST00000407249 PARP4Q9UKK3 1724 aaKnown RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
CDK11B-204ENST00000407249 CSB-PGBD3P0DP91 1061 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms