RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 LIMCH1Q9UPQ0 1083 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 NRKQ7Z2Y5 1582 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 STK3Q13188 491 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 ARHGEF25Q86VW2 580 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 HDAC5Q9UQL6 1122 aa17.92■□□□□ 0.46
ATG4B-206ENST00000405546 FERMT3Q86UX7 667 aa17.91■□□□□ 0.46
ATG4B-206ENST00000405546 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
ATG4B-206ENST00000405546 HYPKQ9NX55 129 aa17.91■□□□□ 0.46
ATG4B-206ENST00000405546 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
ATG4B-206ENST00000405546 ADCK5Q3MIX3 580 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
ATG4B-206ENST00000405546 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 RAD50Q92878 1312 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 ZNF592Q92610 1267 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.462e-8■■□□□ 13.7
ATG4B-206ENST00000405546 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-206ENST00000405546 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-206ENST00000405546 NPHP1O15259 732 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 CUL4AQ13619 759 aa17.9■□□□□ 0.46
ATG4B-206ENST00000405546 DNAJC2Q99543 621 aaKnown RBP17.9■□□□□ 0.46
ATG4B-206ENST00000405546 ADCY9O60503 1353 aa17.89■□□□□ 0.46
ATG4B-206ENST00000405546 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
ATG4B-206ENST00000405546 EAF2Q96CJ1 260 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 LSG1Q9H089 658 aaKnown RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 TATP17735 454 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
ATG4B-206ENST00000405546 C16orf45Q96MC5 204 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-206ENST00000405546 AP5Z1O43299 807 aa17.89■□□□□ 0.45
ATG4B-206ENST00000405546 HOXB7P09629 217 aa17.89■□□□□ 0.45
ATG4B-206ENST00000405546 STX6O43752 255 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 ATF3P18847 181 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 SYT1P21579 422 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 GJB2P29033 226 aa17.88■□□□□ 0.45
ATG4B-206ENST00000405546 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 HMGN5P82970 282 aaKnown RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 NMIQ13287 307 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 UBE3BQ7Z3V4 1068 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 NEUROD6Q96NK8 337 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 LARGE1O95461 756 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 CHAF1AQ13111 956 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 CAMK4Q16566 473 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 RBM8AQ9Y5S9 174 aaKnown RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 USP16Q9Y5T5 823 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 KIF13AQ9H1H9 1805 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 CEMIPQ8WUJ3 1361 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 ERICH4A6NGS2 130 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 GTF2E1P29083 439 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 UTP14CQ5TAP6 766 aaKnown RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 EVI5LQ96CN4 794 aa17.87■□□□□ 0.45
ATG4B-206ENST00000405546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-206ENST00000405546 AOX1Q06278 1338 aa17.86■□□□□ 0.45
ATG4B-206ENST00000405546 FOSBP53539 338 aa17.86■□□□□ 0.45
ATG4B-206ENST00000405546 PRIMPOLQ96LW4 560 aa17.86■□□□□ 0.45
ATG4B-206ENST00000405546 LRMPQ12912 555 aa17.86■□□□□ 0.45
ATG4B-206ENST00000405546 ZNF496Q96IT1 587 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-206ENST00000405546 PIK3C2AO00443 1686 aa17.86■□□□□ 0.45
ATG4B-206ENST00000405546 TTC41PQ6P2S7 1318 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 SASH1O94885 1247 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 ZSCAN22P10073 491 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-206ENST00000405546 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 HSP90B1P14625 803 aaKnown RBP17.85■□□□□ 0.45
ATG4B-206ENST00000405546 PTGS1P23219 599 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 KCNF1Q9H3M0 494 aa17.85■□□□□ 0.45
ATG4B-206ENST00000405546 GOLGA6L4A6NEF3 574 aa17.84■□□□□ 0.45
ATG4B-206ENST00000405546 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
ATG4B-206ENST00000405546 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
ATG4B-206ENST00000405546 PPFIA3O75145 1194 aa17.84■□□□□ 0.45
ATG4B-206ENST00000405546 PHF14O94880 888 aa17.83■□□□□ 0.45
ATG4B-206ENST00000405546 CABP4P57796 275 aa17.83■□□□□ 0.45
ATG4B-206ENST00000405546 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
ATG4B-206ENST00000405546 A0A087WZG4 1122 aa17.83■□□□□ 0.44
ATG4B-206ENST00000405546 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.44
ATG4B-206ENST00000405546 PDE4CQ08493 712 aa17.83■□□□□ 0.44
ATG4B-206ENST00000405546 BLOC1S2Q6QNY1 142 aa17.83■□□□□ 0.44
ATG4B-206ENST00000405546 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 IGKV5-2P06315 115 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-206ENST00000405546 GTPBP4Q9BZE4 634 aaKnown RBP17.82■□□□□ 0.44
ATG4B-206ENST00000405546 SLIT1O75093 1534 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 RNF20Q5VTR2 975 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 NRBP1Q9UHY1 535 aa17.82■□□□□ 0.44
ATG4B-206ENST00000405546 RGPD1P0DJD0 1748 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 TFIP11Q9UBB9 837 aaKnown RBP17.81■□□□□ 0.44
ATG4B-206ENST00000405546 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
ATG4B-206ENST00000405546 A0A0G2JS52 829 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms