RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 USP42Q9H9J4 1324 aaKnown RBP26.17■■□□□ 1.78
TPM1-208ENST00000404484 MYD88Q99836 296 aa26.17■■□□□ 1.78
TPM1-208ENST00000404484 LRRFIP2Q9Y608 721 aaKnown RBP26.17■■□□□ 1.78
TPM1-208ENST00000404484 DCTPP1Q9H773 170 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 UTYO14607 1347 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 NEURL1BA8MQ27 555 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 GRM8O00222 908 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 RGS3P49796 1198 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 NUCB1Q02818 461 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 KIF6Q6ZMV9 814 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 KLHL34Q8N239 644 aa26.16■■□□□ 1.78
TPM1-208ENST00000404484 COL15A1P39059 1388 aa26.15■■□□□ 1.78
TPM1-208ENST00000404484 ZPR1O75312 459 aa26.15■■□□□ 1.78
TPM1-208ENST00000404484 IGKV5-2P06315 115 aa26.15■■□□□ 1.78
TPM1-208ENST00000404484 MMP10P09238 476 aa26.15■■□□□ 1.78
TPM1-208ENST00000404484 ATP8B2P98198 1209 aa26.15■■□□□ 1.78
TPM1-208ENST00000404484 CWF19L2Q2TBE0 894 aaKnown RBP26.15■■□□□ 1.78
TPM1-208ENST00000404484 IL6STP40189 918 aaPredicted RBP26.14■■□□□ 1.78
TPM1-208ENST00000404484 USPL1Q5W0Q7 1092 aa26.14■■□□□ 1.78
TPM1-208ENST00000404484 TTLL7Q6ZT98 887 aa26.14■■□□□ 1.78
TPM1-208ENST00000404484 NPM2Q86SE8 214 aaKnown RBP26.14■■□□□ 1.78
TPM1-208ENST00000404484 NARFQ9UHQ1 456 aa26.14■■□□□ 1.78
TPM1-208ENST00000404484 NBPF7P0C2Y1 421 aaPredicted RBP26.13■■□□□ 1.77
TPM1-208ENST00000404484 ZNF330Q9Y3S2 320 aaPredicted RBP26.13■■□□□ 1.77
TPM1-208ENST00000404484 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
TPM1-208ENST00000404484 GCKRQ14397 625 aa26.12■■□□□ 1.77
TPM1-208ENST00000404484 SKAP1Q86WV1 359 aa26.12■■□□□ 1.77
TPM1-208ENST00000404484 TSHZ2Q9NRE2 1034 aa26.12■■□□□ 1.77
TPM1-208ENST00000404484 ZBTB47Q9UFB7 747 aaPredicted RBP26.12■■□□□ 1.77
TPM1-208ENST00000404484 CHD1LQ86WJ1 897 aa26.12■■□□□ 1.77
TPM1-208ENST00000404484 UTRNP46939 3433 aa26.11■■□□□ 1.77
TPM1-208ENST00000404484 AFDNP55196 1824 aaKnown RBP26.11■■□□□ 1.77
TPM1-208ENST00000404484 GOLGB1Q14789 3259 aaKnown RBP26.1■■□□□ 1.77
TPM1-208ENST00000404484 A0A087WZG4 1122 aa26.1■■□□□ 1.77
TPM1-208ENST00000404484 ANKRD45Q5TZF3 282 aa26.1■■□□□ 1.77
TPM1-208ENST00000404484 BCL2L12Q9HB09 334 aa26.1■■□□□ 1.77
TPM1-208ENST00000404484 TBC1D2BQ9UPU7 963 aa26.1■■□□□ 1.77
TPM1-208ENST00000404484 NLGN2Q8NFZ4 835 aa26.09■■□□□ 1.77
TPM1-208ENST00000404484 ZBTB3Q9H5J0 574 aa26.08■■□□□ 1.77
TPM1-208ENST00000404484 MAP3K15Q6ZN16 1313 aa26.08■■□□□ 1.77
TPM1-208ENST00000404484 TM4SF1P30408 202 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 MTX1Q13505 466 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 SSH3Q8TE77 659 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 CD2APQ9Y5K6 639 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 HSP90AB3PQ58FF7 597 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 CCDC191Q8NCU4 936 aa26.07■■□□□ 1.76
TPM1-208ENST00000404484 CWC25Q9NXE8 425 aaPredicted RBP26.07■■□□□ 1.76
TPM1-208ENST00000404484 LNPKQ9C0E8 428 aa26.06■■□□□ 1.76
TPM1-208ENST00000404484 PARP3Q9Y6F1 533 aa26.06■■□□□ 1.76
TPM1-208ENST00000404484 PNMA6EA0A0J9YXQ4 647 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 ATP5J2-PTCD1G3V325 749 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 DDR1Q08345 913 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 TCIRG1Q13488 830 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 POLA2Q14181 598 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 PPP1R42Q7Z4L9 355 aa26.05■■□□□ 1.76
TPM1-208ENST00000404484 ERVV-1B6SEH8 477 aa26.04■■□□□ 1.76
TPM1-208ENST00000404484 TRIM28Q13263 835 aaKnown RBP26.04■■□□□ 1.76
TPM1-208ENST00000404484 SRGAP3O43295 1099 aa26.03■■□□□ 1.76
TPM1-208ENST00000404484 NFIXQ14938 502 aa26.03■■□□□ 1.76
TPM1-208ENST00000404484 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
TPM1-208ENST00000404484 CAMTA2O94983 1202 aa26.03■■□□□ 1.76
TPM1-208ENST00000404484 GIGYF2Q6Y7W6 1299 aaKnown RBP26.03■■□□□ 1.76
TPM1-208ENST00000404484 SUCLG2Q96I99 432 aa26.03■■□□□ 1.76
TPM1-208ENST00000404484 ISCA1Q9BUE6 129 aa26.03■■□□□ 1.76
TPM1-208ENST00000404484 POLRMTO00411 1230 aaKnown RBP26.02■■□□□ 1.76
TPM1-208ENST00000404484 PDE4AP27815 886 aa26.02■■□□□ 1.76
TPM1-208ENST00000404484 HSP90AB4PQ58FF6 505 aa26.02■■□□□ 1.76
TPM1-208ENST00000404484 RAB11FIP3O75154 756 aa26■■□□□ 1.75
TPM1-208ENST00000404484 FAM161AQ3B820 660 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 TBC1D9BQ66K14 1250 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 BICDL1Q6ZP65 573 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 UBE3BQ7Z3V4 1068 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 BICC1Q9H694 974 aaKnown RBP25.99■■□□□ 1.75
TPM1-208ENST00000404484 DCAF8L1A6NGE4 600 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 H7C1W4 665 aa25.99■■□□□ 1.75
TPM1-208ENST00000404484 KAZALD1Q96I82 304 aa25.98■■□□□ 1.75
TPM1-208ENST00000404484 LRRCC1Q9C099 1032 aa25.98■■□□□ 1.75
TPM1-208ENST00000404484 EXOC6BQ9Y2D4 811 aa25.98■■□□□ 1.75
TPM1-208ENST00000404484 ANKRD36CQ5JPF3 1778 aa25.98■■□□□ 1.75
TPM1-208ENST00000404484 CASP7P55210 303 aa25.97■■□□□ 1.75
TPM1-208ENST00000404484 BACH2Q9BYV9 841 aa25.97■■□□□ 1.75
TPM1-208ENST00000404484 SURF6O75683 361 aaKnown RBP25.95■■□□□ 1.75
TPM1-208ENST00000404484 SERPINB2P05120 415 aa25.95■■□□□ 1.75
TPM1-208ENST00000404484 NOP58Q9Y2X3 529 aaKnown RBP25.95■■□□□ 1.75
TPM1-208ENST00000404484 GPR162Q16538 588 aa25.95■■□□□ 1.74
TPM1-208ENST00000404484 RABL6Q3YEC7 729 aaPredicted RBP25.95■■□□□ 1.74
TPM1-208ENST00000404484 CLEC4GQ6UXB4 293 aa25.95■■□□□ 1.74
TPM1-208ENST00000404484 C10orf71Q711Q0 1435 aa25.94■■□□□ 1.74
TPM1-208ENST00000404484 APBB1O00213 710 aa25.94■■□□□ 1.74
TPM1-208ENST00000404484 RGL2O15211 777 aa25.94■■□□□ 1.74
TPM1-208ENST00000404484 NUP98P52948 1817 aa25.93■■□□□ 1.74
TPM1-208ENST00000404484 PCCAP05165 728 aaPredicted RBP25.93■■□□□ 1.74
TPM1-208ENST00000404484 TGFB2P61812 414 aa25.93■■□□□ 1.74
TPM1-208ENST00000404484 HLFQ16534 295 aa25.93■■□□□ 1.74
TPM1-208ENST00000404484 ERC1Q8IUD2 1116 aa25.93■■□□□ 1.74
TPM1-208ENST00000404484 ZNF652Q9Y2D9 606 aa25.93■■□□□ 1.74
TPM1-208ENST00000404484 KIF1BPQ96EK5 621 aa25.92■■□□□ 1.74
TPM1-208ENST00000404484 SETDB2Q96T68 719 aa25.92■■□□□ 1.74
TPM1-208ENST00000404484 A0A0G2JLW4 131 aa25.91■■□□□ 1.74
TPM1-208ENST00000404484 NLRP10Q86W26 655 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms