RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 VPS37CA5D8V6 355 aaPredicted RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 FIBPO43427 364 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 MSNP26038 577 aaKnown RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 LRSAM1Q6UWE0 723 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 NECAB1Q8N987 351 aa9.08□□□□□ -0.96
NLRC4-204ENST00000404025 DNAJC2Q99543 621 aaKnown RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 ZNF330Q9Y3S2 320 aaPredicted RBP9.08□□□□□ -0.96
NLRC4-204ENST00000404025 TMEM94Q12767 1356 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 CCDC171Q6TFL3 1326 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 USP42Q9H9J4 1324 aaKnown RBP9.07□□□□□ -0.96
NLRC4-204ENST00000404025 HIP1O00291 1037 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 STX6O43752 255 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 LARGE1O95461 756 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 TTC14Q96N46 770 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 CNPY2Q9Y2B0 182 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 NDUFB9Q9Y6M9 179 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 CYP27B1O15528 508 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 SYT1P21579 422 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 DCAF5Q96JK2 942 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 MED1Q15648 1581 aaPredicted RBP9.07□□□□□ -0.96
NLRC4-204ENST00000404025 ZSCAN22P10073 491 aaPredicted RBP9.07□□□□□ -0.96
NLRC4-204ENST00000404025 GJB2P29033 226 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
NLRC4-204ENST00000404025 HEG1Q9ULI3 1381 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 A0A0D9SFI3 127 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 A0A0U1RQG5 324 aaPredicted RBP9.06□□□□□ -0.96
NLRC4-204ENST00000404025 TOM1L2Q6ZVM7 507 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 NEUROD6Q96NK8 337 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
NLRC4-204ENST00000404025 TFCP2Q12800 502 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 VPS53Q5VIR6 699 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 CADPS2Q86UW7 1296 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 PPP1R9BQ96SB3 815 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 PRDM11Q9NQV5 511 aa9.06□□□□□ -0.96
NLRC4-204ENST00000404025 USP54Q70EL1 1684 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 PTMAP06454 111 aaKnown RBP9.05□□□□□ -0.96
NLRC4-204ENST00000404025 PSMA5P28066 241 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 STK3Q13188 491 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 BLOC1S2Q6QNY1 142 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 ZSCAN31Q96LW9 406 aaPredicted RBP9.05□□□□□ -0.96
NLRC4-204ENST00000404025 ATP6V1DQ9Y5K8 247 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 KDM6AO15550 1401 aaPredicted RBP9.05□□□□□ -0.96
NLRC4-204ENST00000404025 KDM3BQ7LBC6 1761 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 HSPA2P54652 639 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 NECTIN1Q15223 517 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 LMBR1LQ6UX01 489 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 SLIT3O75094 1523 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 UTYO14607 1347 aa9.05□□□□□ -0.96
NLRC4-204ENST00000404025 SLC27A2O14975 620 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 PHF14O94880 888 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 F13A1P00488 732 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 IL17RAQ96F46 866 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.04□□□□□ -0.96
NLRC4-204ENST00000404025 OVOS2A0A0G2JMS6 1433 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 FGD1P98174 961 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 ME3Q16798 604 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 ZSCAN30Q86W11 494 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 SH2B1Q9NRF2 756 aaPredicted RBP9.04□□□□□ -0.96
NLRC4-204ENST00000404025 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 MEGF6O75095 1541 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 TNNI3KQ59H18 835 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 LARP1BQ659C4 914 aaKnown RBP9.04□□□□□ -0.96
NLRC4-204ENST00000404025 MAP4K1Q92918 833 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 STRN4Q9NRL3 753 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
NLRC4-204ENST00000404025 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
NLRC4-204ENST00000404025 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 DDX46Q7L014 1031 aaKnown RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 ZNF589Q86UQ0 364 aaPredicted RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 TM6SF1Q9BZW5 370 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 HSP90B1P14625 803 aaKnown RBP9.03□□□□□ -0.96
NLRC4-204ENST00000404025 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 TPCN1Q9ULQ1 816 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 A1BGP04217 495 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 CCDC129Q6ZRS4 1044 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 MPNDQ8N594 471 aa9.03□□□□□ -0.96
NLRC4-204ENST00000404025 CHGBP05060 677 aa9.02□□□□□ -0.96
NLRC4-204ENST00000404025 TTLL7Q6ZT98 887 aa9.02□□□□□ -0.96
NLRC4-204ENST00000404025 PLBD2Q8NHP8 589 aa9.02□□□□□ -0.96
NLRC4-204ENST00000404025 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.96
NLRC4-204ENST00000404025 SEC62Q99442 399 aaKnown RBP9.02□□□□□ -0.96
NLRC4-204ENST00000404025 NAP1L2Q9ULW6 460 aaPredicted RBP9.02□□□□□ -0.96
NLRC4-204ENST00000404025 TAF6LQ9Y6J9 622 aa9.02□□□□□ -0.96
NLRC4-204ENST00000404025 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
NLRC4-204ENST00000404025 BCL11BQ9C0K0 894 aaPredicted RBP9.02□□□□□ -0.97
NLRC4-204ENST00000404025 EVA1CP58658 441 aa9.02□□□□□ -0.97
NLRC4-204ENST00000404025 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
NLRC4-204ENST00000404025 FAM173BQ6P4H8 233 aa9.02□□□□□ -0.97
NLRC4-204ENST00000404025 CCDC85AQ96PX6 553 aaPredicted RBP9.02□□□□□ -0.97
NLRC4-204ENST00000404025 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
NLRC4-204ENST00000404025 ATP5JP18859 108 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms