RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZNF853P0CG23 659 aa20.02■□□□□ 0.8
TPM1-207ENST00000403994 ALDH1B1P30837 517 aa20.02■□□□□ 0.8
TPM1-207ENST00000403994 AIMP1Q12904 312 aaKnown RBP20.02■□□□□ 0.8
TPM1-207ENST00000403994 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
TPM1-207ENST00000403994 PPP1R42Q7Z4L9 355 aa20.02■□□□□ 0.8
TPM1-207ENST00000403994 RPGRQ92834 1020 aaKnown RBP20.02■□□□□ 0.8
TPM1-207ENST00000403994 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
TPM1-207ENST00000403994 APLP1P51693 650 aa20.01■□□□□ 0.79
TPM1-207ENST00000403994 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
TPM1-207ENST00000403994 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
TPM1-207ENST00000403994 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
TPM1-207ENST00000403994 VEGFAP15692 232 aaPredicted RBP20■□□□□ 0.79
TPM1-207ENST00000403994 FSTL1Q12841 308 aa20■□□□□ 0.79
TPM1-207ENST00000403994 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
TPM1-207ENST00000403994 IFT57Q9NWB7 429 aa20■□□□□ 0.79
TPM1-207ENST00000403994 HSP90AB3PQ58FF7 597 aa19.99■□□□□ 0.79
TPM1-207ENST00000403994 RTKN2Q8IZC4 609 aa19.99■□□□□ 0.79
TPM1-207ENST00000403994 UTP14AQ9BVJ6 771 aaKnown RBP19.99■□□□□ 0.79
TPM1-207ENST00000403994 ZNF277Q9NRM2 450 aaPredicted RBP19.99■□□□□ 0.79
TPM1-207ENST00000403994 PCNTO95613 3336 aa19.99■□□□□ 0.79
TPM1-207ENST00000403994 COL4A5P29400 1685 aa19.99■□□□□ 0.79
TPM1-207ENST00000403994 SCN4AP35499 1836 aa19.99■□□□□ 0.79
TPM1-207ENST00000403994 POTECB2RU33 542 aa19.98■□□□□ 0.79
TPM1-207ENST00000403994 CALD1Q05682 793 aaKnown RBP19.98■□□□□ 0.79
TPM1-207ENST00000403994 DPY19L2Q6NUT2 758 aa19.98■□□□□ 0.79
TPM1-207ENST00000403994 SLC51AQ86UW1 340 aa19.98■□□□□ 0.79
TPM1-207ENST00000403994 NLRP10Q86W26 655 aa19.98■□□□□ 0.79
TPM1-207ENST00000403994 DBF4Q9UBU7 674 aaPredicted RBP19.98■□□□□ 0.79
TPM1-207ENST00000403994 GNAI1P63096 354 aa19.97■□□□□ 0.79
TPM1-207ENST00000403994 SMC1BQ8NDV3 1235 aa19.97■□□□□ 0.79
TPM1-207ENST00000403994 LRRC37AA6NMS7 1700 aa19.96■□□□□ 0.79
TPM1-207ENST00000403994 TCIRG1Q13488 830 aa19.96■□□□□ 0.79
TPM1-207ENST00000403994 RBM17Q96I25 401 aaKnown RBP19.96■□□□□ 0.79
TPM1-207ENST00000403994 CRAMP1Q96RY5 1269 aa19.96■□□□□ 0.79
TPM1-207ENST00000403994 PSMD1Q99460 953 aa19.96■□□□□ 0.79
TPM1-207ENST00000403994 ZNF541Q9H0D2 1346 aa19.96■□□□□ 0.79
TPM1-207ENST00000403994 TAF1P21675 1872 aa19.95■□□□□ 0.78
TPM1-207ENST00000403994 ZNF316A6NFI3 1004 aaPredicted RBP19.95■□□□□ 0.78
TPM1-207ENST00000403994 PPEF1O14829 653 aaPredicted RBP19.95■□□□□ 0.78
TPM1-207ENST00000403994 SLC10A5Q5PT55 438 aa19.95■□□□□ 0.78
TPM1-207ENST00000403994 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
TPM1-207ENST00000403994 DDNO94850 711 aaPredicted RBP19.94■□□□□ 0.78
TPM1-207ENST00000403994 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
TPM1-207ENST00000403994 CC2D2BQ6DHV5 1058 aa19.94■□□□□ 0.78
TPM1-207ENST00000403994 NLRP3Q96P20 1036 aa19.94■□□□□ 0.78
TPM1-207ENST00000403994 HYPKQ9NX55 129 aa19.94■□□□□ 0.78
TPM1-207ENST00000403994 ABCC4O15439 1325 aa19.94■□□□□ 0.78
TPM1-207ENST00000403994 SH3TC1Q8TE82 1336 aa19.94■□□□□ 0.78
TPM1-207ENST00000403994 HCLS1P14317 486 aaPredicted RBP19.93■□□□□ 0.78
TPM1-207ENST00000403994 SYNE4Q8N205 404 aa19.93■□□□□ 0.78
TPM1-207ENST00000403994 L3MBTL3Q96JM7 780 aaPredicted RBP19.93■□□□□ 0.78
TPM1-207ENST00000403994 TRMT112Q9UI30 125 aaKnown RBP19.93■□□□□ 0.78
TPM1-207ENST00000403994 ADAMTSL1Q8N6G6 1762 aa19.93■□□□□ 0.78
TPM1-207ENST00000403994 ANKRD13DQ6ZTN6 518 aa19.92■□□□□ 0.78
TPM1-207ENST00000403994 HTRA3P83110 453 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 C8orf58Q8NAV2 365 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 MRS2Q9HD23 443 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 DUOX1Q9NRD9 1551 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 COL4A1P02462 1669 aa19.91■□□□□ 0.78
TPM1-207ENST00000403994 FZD9O00144 591 aa19.9■□□□□ 0.78
TPM1-207ENST00000403994 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
TPM1-207ENST00000403994 GRIPAP1Q4V328 841 aa19.9■□□□□ 0.78
TPM1-207ENST00000403994 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
TPM1-207ENST00000403994 ANP32CO43423 234 aa19.89■□□□□ 0.77
TPM1-207ENST00000403994 LTBP1Q14766 1721 aa19.89■□□□□ 0.77
TPM1-207ENST00000403994 CCDC27Q2M243 656 aa19.89■□□□□ 0.77
TPM1-207ENST00000403994 DNAJC5GQ8N7S2 189 aa19.89■□□□□ 0.77
TPM1-207ENST00000403994 TSR2Q969E8 191 aaKnown RBP19.89■□□□□ 0.77
TPM1-207ENST00000403994 ATP6V0A2Q9Y487 856 aa19.89■□□□□ 0.77
TPM1-207ENST00000403994 IQCA1LA6NCM1 817 aa19.88■□□□□ 0.77
TPM1-207ENST00000403994 ATP5J2-PTCD1G3V325 749 aa19.88■□□□□ 0.77
TPM1-207ENST00000403994 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
TPM1-207ENST00000403994 POTEJP0CG39 1038 aa19.88■□□□□ 0.77
TPM1-207ENST00000403994 GOLGA2Q08379 1002 aa19.88■□□□□ 0.77
TPM1-207ENST00000403994 PHAXQ9H814 394 aaKnown RBP19.88■□□□□ 0.77
TPM1-207ENST00000403994 WWC1Q8IX03 1113 aa19.87■□□□□ 0.77
TPM1-207ENST00000403994 JDP2Q8WYK2 163 aa19.87■□□□□ 0.77
TPM1-207ENST00000403994 TSPYL6Q8N831 410 aa19.86■□□□□ 0.77
TPM1-207ENST00000403994 FAM89AQ96GI7 184 aa19.86■□□□□ 0.77
TPM1-207ENST00000403994 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
TPM1-207ENST00000403994 TRIM28Q13263 835 aaKnown RBP19.85■□□□□ 0.77
TPM1-207ENST00000403994 GRAPQ13588 217 aa19.85■□□□□ 0.77
TPM1-207ENST00000403994 CHADLQ6NUI6 762 aa19.85■□□□□ 0.77
TPM1-207ENST00000403994 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
TPM1-207ENST00000403994 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
TPM1-207ENST00000403994 GPC2Q8N158 579 aa19.85■□□□□ 0.77
TPM1-207ENST00000403994 LARGE2Q8N3Y3 721 aa19.85■□□□□ 0.77
TPM1-207ENST00000403994 GRAPLQ8TC17 118 aaPredicted RBP19.85■□□□□ 0.77
TPM1-207ENST00000403994 BBOX1O75936 387 aa19.84■□□□□ 0.77
TPM1-207ENST00000403994 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
TPM1-207ENST00000403994 KLRG1Q96E93 195 aa19.84■□□□□ 0.77
TPM1-207ENST00000403994 HACL1Q9UJ83 578 aa19.84■□□□□ 0.77
TPM1-207ENST00000403994 IL16Q14005 1332 aa19.83■□□□□ 0.77
TPM1-207ENST00000403994 MYH3P11055 1940 aa19.83■□□□□ 0.77
TPM1-207ENST00000403994 PPIP5K2O43314 1243 aa19.83■□□□□ 0.77
TPM1-207ENST00000403994 AOC3Q16853 763 aa19.83■□□□□ 0.77
TPM1-207ENST00000403994 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.77
TPM1-207ENST00000403994 LDHDQ86WU2 507 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms