RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 USP42Q9H9J4 1324 aaKnown RBP23.82■■□□□ 1.4
CCDC47-202ENST00000403162 ZSCAN22P10073 491 aaPredicted RBP23.82■■□□□ 1.4
CCDC47-202ENST00000403162 CCDC183Q5T5S1 534 aa23.82■■□□□ 1.4
CCDC47-202ENST00000403162 KLHL34Q8N239 644 aa23.81■■□□□ 1.4
CCDC47-202ENST00000403162 LETM1O95202 739 aaPredicted RBP23.81■■□□□ 1.4
CCDC47-202ENST00000403162 TEFQ10587 303 aa23.81■■□□□ 1.4
CCDC47-202ENST00000403162 MAP7D2Q96T17 732 aa23.81■■□□□ 1.4
CCDC47-202ENST00000403162 FOXD4L6Q3SYB3 417 aaPredicted RBP23.8■■□□□ 1.4
CCDC47-202ENST00000403162 FOXD4L3Q6VB84 417 aaPredicted RBP23.8■■□□□ 1.4
CCDC47-202ENST00000403162 CDCA7Q9BWT1 371 aaPredicted RBP23.8■■□□□ 1.4
CCDC47-202ENST00000403162 LIMCH1Q9UPQ0 1083 aa23.8■■□□□ 1.4
CCDC47-202ENST00000403162 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.8■■□□□ 1.4
CCDC47-202ENST00000403162 UQCRHLA0A096LP55 91 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 SRGAP3O43295 1099 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 MAP4K4O95819 1239 aaPredicted RBP23.79■■□□□ 1.4
CCDC47-202ENST00000403162 PTMAP06454 111 aaKnown RBP23.79■■□□□ 1.4
CCDC47-202ENST00000403162 UQCRHP07919 91 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 HSP90AB4PQ58FF6 505 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 HOXB7P09629 217 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 AK2P54819 239 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 WNK3Q9BYP7 1800 aa23.79■■□□□ 1.4
CCDC47-202ENST00000403162 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 EXOC5O00471 708 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 KIAA2012Q0VF49 1180 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 SASS6Q6UVJ0 657 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 BARGINQ6ZT62 677 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 RUFY3Q7L099 469 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 DCAF5Q96JK2 942 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 KDM6AO15550 1401 aaPredicted RBP23.78■■□□□ 1.4
CCDC47-202ENST00000403162 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.78■■□□□ 1.4
CCDC47-202ENST00000403162 STX6O43752 255 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 UBE2HP62256 183 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 RASEFQ8IZ41 740 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCDC47-202ENST00000403162 TTC41PQ6P2S7 1318 aa23.78■■□□□ 1.4
CCDC47-202ENST00000403162 DYNC1I1O14576 645 aa23.77■■□□□ 1.4
CCDC47-202ENST00000403162 CHMP4AQ9BY43 222 aa23.77■■□□□ 1.4
CCDC47-202ENST00000403162 CNPY2Q9Y2B0 182 aa23.77■■□□□ 1.4
CCDC47-202ENST00000403162 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
CCDC47-202ENST00000403162 SYT1P21579 422 aa23.76■■□□□ 1.39
CCDC47-202ENST00000403162 FAM98CQ17RN3 349 aaKnown RBP23.76■■□□□ 1.39
CCDC47-202ENST00000403162 BEND3Q5T5X7 828 aa23.76■■□□□ 1.39
CCDC47-202ENST00000403162 ATP6V1DQ9Y5K8 247 aa23.76■■□□□ 1.39
CCDC47-202ENST00000403162 F13A1P00488 732 aa23.75■■□□□ 1.39
CCDC47-202ENST00000403162 NBPF7P0C2Y1 421 aaPredicted RBP23.75■■□□□ 1.39
CCDC47-202ENST00000403162 DNAAF4Q8WXU2 420 aa23.75■■□□□ 1.39
CCDC47-202ENST00000403162 ADAMTS7Q9UKP4 1686 aa23.75■■□□□ 1.39
CCDC47-202ENST00000403162 GLRX3O76003 335 aaKnown RBP23.75■■□□□ 1.39
CCDC47-202ENST00000403162 EIF4A1P60842 406 aaKnown RBP23.75■■□□□ 1.39
CCDC47-202ENST00000403162 SMC3Q9UQE7 1217 aa23.75■■□□□ 1.39
CCDC47-202ENST00000403162 RBM10P98175 930 aaKnown RBP23.74■■□□□ 1.39
CCDC47-202ENST00000403162 DDB1Q16531 1140 aa23.74■■□□□ 1.39
CCDC47-202ENST00000403162 SCN11AQ9UI33 1791 aa23.74■■□□□ 1.39
CCDC47-202ENST00000403162 TNS2Q63HR2 1409 aa23.73■■□□□ 1.39
CCDC47-202ENST00000403162 NKX1-1Q15270 411 aaPredicted RBP23.73■■□□□ 1.39
CCDC47-202ENST00000403162 CWC27Q6UX04 472 aaKnown RBP23.73■■□□□ 1.39
CCDC47-202ENST00000403162 RUFY2Q8WXA3 655 aa23.73■■□□□ 1.39
CCDC47-202ENST00000403162 TRPC5Q9UL62 973 aaPredicted RBP23.73■■□□□ 1.39
CCDC47-202ENST00000403162 BTBD11A6QL63 1104 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 MTX1Q13505 466 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 HYPKQ9NX55 129 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 KCNB2Q92953 911 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 GJD4Q96KN9 370 aaPredicted RBP23.72■■□□□ 1.39
CCDC47-202ENST00000403162 FAM13BQ9NYF5 915 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 CHPF2Q9P2E5 772 aa23.72■■□□□ 1.39
CCDC47-202ENST00000403162 A0A0G2JS52 829 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 CASTP20810 708 aaKnown RBP23.71■■□□□ 1.39
CCDC47-202ENST00000403162 VPS53Q5VIR6 699 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 MTERF4Q7Z6M4 381 aaKnown RBP23.71■■□□□ 1.39
CCDC47-202ENST00000403162 NFATC2IPQ8NCF5 419 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 TM6SF1Q9BZW5 370 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 USP25Q9UHP3 1055 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 ATRNO75882 1429 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 PI4KAP2A4QPH2 592 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 EIF2S2P20042 333 aaKnown RBP23.71■■□□□ 1.39
CCDC47-202ENST00000403162 PI4KAP1Q8N8J0 262 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 DIAPH3Q9NSV4 1193 aa23.71■■□□□ 1.39
CCDC47-202ENST00000403162 CABP4P57796 275 aa23.7■■□□□ 1.38
CCDC47-202ENST00000403162 PIBF1Q8WXW3 757 aa23.7■■□□□ 1.38
CCDC47-202ENST00000403162 ZSCAN31Q96LW9 406 aaPredicted RBP23.7■■□□□ 1.38
CCDC47-202ENST00000403162 SH2B1Q9NRF2 756 aaPredicted RBP23.7■■□□□ 1.38
CCDC47-202ENST00000403162 ZMYND15Q9H091 742 aa23.69■■□□□ 1.38
CCDC47-202ENST00000403162 QTRT2Q9H974 415 aaKnown RBP23.69■■□□□ 1.38
CCDC47-202ENST00000403162 ADCY9O60503 1353 aa23.69■■□□□ 1.38
CCDC47-202ENST00000403162 LARGE1O95461 756 aa23.69■■□□□ 1.38
CCDC47-202ENST00000403162 ADCY5O95622 1261 aa23.69■■□□□ 1.38
CCDC47-202ENST00000403162 FUCA2Q9BTY2 467 aa23.69■■□□□ 1.38
CCDC47-202ENST00000403162 HCLS1P14317 486 aaPredicted RBP23.68■■□□□ 1.38
CCDC47-202ENST00000403162 ZSWIM6Q9HCJ5 1215 aa23.68■■□□□ 1.38
CCDC47-202ENST00000403162 CLASRPQ8N2M8 674 aaKnown RBP23.68■■□□□ 1.38
CCDC47-202ENST00000403162 SIPA1L3O60292 1781 aaPredicted RBP23.67■■□□□ 1.38
CCDC47-202ENST00000403162 ERVV-2B6SEH9 535 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 FIBPO43427 364 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 KCNQ3O43525 872 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 GJB2P29033 226 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 LARP6Q9BRS8 491 aaKnown RBP23.67■■□□□ 1.38
CCDC47-202ENST00000403162 PDRG1Q9NUG6 133 aa23.67■■□□□ 1.38
CCDC47-202ENST00000403162 MTMR6Q9Y217 621 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms