RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TTLL6Q8N841 843 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 RIC1Q4ADV7 1423 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 ABCC12Q96J65 1359 aa24.65■■□□□ 1.54
RTN4-207ENST00000402434 STYK1Q6J9G0 422 aa24.64■■□□□ 1.54
RTN4-207ENST00000402434 G2E3Q7L622 706 aa24.64■■□□□ 1.54
RTN4-207ENST00000402434 ARFGEF1Q9Y6D6 1849 aa24.64■■□□□ 1.53
RTN4-207ENST00000402434 SLC10A5Q5PT55 438 aa24.64■■□□□ 1.53
RTN4-207ENST00000402434 KSR2Q6VAB6 950 aa24.64■■□□□ 1.53
RTN4-207ENST00000402434 MASTLQ96GX5 879 aa24.64■■□□□ 1.53
RTN4-207ENST00000402434 ARFGEF2Q9Y6D5 1785 aa24.63■■□□□ 1.53
RTN4-207ENST00000402434 COL11A2P13942 1736 aaPredicted RBP24.63■■□□□ 1.53
RTN4-207ENST00000402434 CRY2Q49AN0 593 aa24.63■■□□□ 1.53
RTN4-207ENST00000402434 ZNF622Q969S3 477 aaKnown RBP eCLIP24.63■■□□□ 1.532e-35■□□□□ 10.6
RTN4-207ENST00000402434 PI4KAP2A4QPH2 592 aa24.62■■□□□ 1.53
RTN4-207ENST00000402434 ATP5J2-PTCD1G3V325 749 aa24.62■■□□□ 1.53
RTN4-207ENST00000402434 PI4KAP1Q8N8J0 262 aa24.62■■□□□ 1.53
RTN4-207ENST00000402434 METTL22Q9BUU2 404 aaPredicted RBP24.62■■□□□ 1.53
RTN4-207ENST00000402434 NPR1P16066 1061 aa24.61■■□□□ 1.53
RTN4-207ENST00000402434 YY1P25490 414 aa24.61■■□□□ 1.53
RTN4-207ENST00000402434 FLIIQ13045 1269 aa24.61■■□□□ 1.53
RTN4-207ENST00000402434 CNKSR1Q969H4 720 aa24.61■■□□□ 1.53
RTN4-207ENST00000402434 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
RTN4-207ENST00000402434 MAP3K2Q9Y2U5 619 aa24.6■■□□□ 1.53
RTN4-207ENST00000402434 ADCY9O60503 1353 aa24.6■■□□□ 1.53
RTN4-207ENST00000402434 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
RTN4-207ENST00000402434 ARHGAP27Q6ZUM4 889 aa24.58■■□□□ 1.53
RTN4-207ENST00000402434 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
RTN4-207ENST00000402434 MYD88Q99836 296 aa24.58■■□□□ 1.53
RTN4-207ENST00000402434 TNRC6CQ9HCJ0 1690 aaKnown RBP24.58■■□□□ 1.53
RTN4-207ENST00000402434 CCDC191Q8NCU4 936 aa24.58■■□□□ 1.52
RTN4-207ENST00000402434 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
RTN4-207ENST00000402434 HNRNPUQ00839 825 aaKnown RBP eCLIP24.57■■□□□ 1.523e-6■□□□□ 10
RTN4-207ENST00000402434 ZNF428Q96B54 188 aa24.57■■□□□ 1.52
RTN4-207ENST00000402434 NLRP3Q96P20 1036 aa24.57■■□□□ 1.52
RTN4-207ENST00000402434 PRPF40BQ6NWY9 871 aaKnown RBP24.56■■□□□ 1.52
RTN4-207ENST00000402434 C3orf67Q6ZVT6 689 aa24.56■■□□□ 1.52
RTN4-207ENST00000402434 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
RTN4-207ENST00000402434 FKBP5Q13451 457 aaPredicted RBP24.55■■□□□ 1.52
RTN4-207ENST00000402434 FAM89AQ96GI7 184 aa24.55■■□□□ 1.52
RTN4-207ENST00000402434 SLX4Q8IY92 1834 aa24.55■■□□□ 1.52
RTN4-207ENST00000402434 IGKV5-2P06315 115 aa24.54■■□□□ 1.52
RTN4-207ENST00000402434 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
RTN4-207ENST00000402434 C7orf43Q8WVR3 580 aa24.54■■□□□ 1.52
RTN4-207ENST00000402434 CT47B1P0C2W7 299 aaPredicted RBP24.53■■□□□ 1.52
RTN4-207ENST00000402434 NEXNQ0ZGT2 675 aa24.53■■□□□ 1.52
RTN4-207ENST00000402434 ZBTB38Q8NAP3 1195 aaPredicted RBP24.53■■□□□ 1.52
RTN4-207ENST00000402434 CWC25Q9NXE8 425 aaPredicted RBP24.53■■□□□ 1.52
RTN4-207ENST00000402434 C21orf2O43822 256 aa24.52■■□□□ 1.52
RTN4-207ENST00000402434 DNAAF4Q8WXU2 420 aa24.52■■□□□ 1.52
RTN4-207ENST00000402434 RPGRQ92834 1020 aaKnown RBP24.52■■□□□ 1.52
RTN4-207ENST00000402434 CRAMP1Q96RY5 1269 aa24.52■■□□□ 1.52
RTN4-207ENST00000402434 PCCAP05165 728 aaPredicted RBP24.51■■□□□ 1.51
RTN4-207ENST00000402434 SSH1Q8WYL5 1049 aa24.51■■□□□ 1.51
RTN4-207ENST00000402434 NEURL1BA8MQ27 555 aa24.5■■□□□ 1.51
RTN4-207ENST00000402434 MRPL50Q8N5N7 158 aaKnown RBP24.5■■□□□ 1.51
RTN4-207ENST00000402434 RBM17Q96I25 401 aaKnown RBP24.5■■□□□ 1.51
RTN4-207ENST00000402434 IRS4O14654 1257 aaPredicted RBP24.49■■□□□ 1.51
RTN4-207ENST00000402434 CWF19L2Q2TBE0 894 aaKnown RBP24.49■■□□□ 1.51
RTN4-207ENST00000402434 ALDH1L2Q3SY69 923 aa24.49■■□□□ 1.51
RTN4-207ENST00000402434 RTL5Q5HYW3 569 aaPredicted RBP24.49■■□□□ 1.51
RTN4-207ENST00000402434 SOGA3Q5TF21 947 aa24.49■■□□□ 1.51
RTN4-207ENST00000402434 LINS1Q8NG48 757 aa24.49■■□□□ 1.51
RTN4-207ENST00000402434 ZNF219Q9P2Y4 722 aaPredicted RBP24.48■■□□□ 1.51
RTN4-207ENST00000402434 DDX60Q8IY21 1712 aaKnown RBP24.48■■□□□ 1.51
RTN4-207ENST00000402434 NFKBIEO00221 500 aa24.47■■□□□ 1.51
RTN4-207ENST00000402434 HSP90B1P14625 803 aaKnown RBP24.47■■□□□ 1.51
RTN4-207ENST00000402434 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
RTN4-207ENST00000402434 CACNA1SQ13698 1873 aa24.47■■□□□ 1.51
RTN4-207ENST00000402434 LAMB2P55268 1798 aa24.46■■□□□ 1.51
RTN4-207ENST00000402434 ZBED9Q6R2W3 1325 aa24.46■■□□□ 1.51
RTN4-207ENST00000402434 F6X3S4 739 aa24.46■■□□□ 1.51
RTN4-207ENST00000402434 LTBP3Q9NS15 1303 aa24.45■■□□□ 1.51
RTN4-207ENST00000402434 GCKRQ14397 625 aa24.45■■□□□ 1.51
RTN4-207ENST00000402434 FER1L6Q2WGJ9 1857 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 SBF1O95248 1867 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 CDHR2Q9BYE9 1310 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 RASSF7Q02833 373 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 BEND3Q5T5X7 828 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 C9orf131Q5VYM1 1079 aa24.45■■□□□ 1.5
RTN4-207ENST00000402434 ZNF784Q8NCA9 323 aaPredicted RBP24.45■■□□□ 1.5
RTN4-207ENST00000402434 ABCC4O15439 1325 aa24.44■■□□□ 1.5
RTN4-207ENST00000402434 H7C1W4 665 aa24.44■■□□□ 1.5
RTN4-207ENST00000402434 CCDC93Q567U6 631 aa24.44■■□□□ 1.5
RTN4-207ENST00000402434 PTPRCP08575 1304 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 PDE8AO60658 829 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 BBOX1O75936 387 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 LMNB1P20700 586 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 PRELPP51888 382 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 BRPF1P55201 1214 aaPredicted RBP24.43■■□□□ 1.5
RTN4-207ENST00000402434 CC2D2BQ6DHV5 1058 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 DDX46Q7L014 1031 aaKnown RBP24.43■■□□□ 1.5
RTN4-207ENST00000402434 JARID2Q92833 1246 aaPredicted RBP24.43■■□□□ 1.5
RTN4-207ENST00000402434 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
RTN4-207ENST00000402434 OLFM4Q6UX06 510 aa24.42■■□□□ 1.5
RTN4-207ENST00000402434 RTKN2Q8IZC4 609 aa24.42■■□□□ 1.5
RTN4-207ENST00000402434 TAOK3Q9H2K8 898 aa24.41■■□□□ 1.5
RTN4-207ENST00000402434 SMC4Q9NTJ3 1288 aa24.41■■□□□ 1.5
RTN4-207ENST00000402434 RNF181Q9P0P0 153 aa24.41■■□□□ 1.5
RTN4-207ENST00000402434 SNED1Q8TER0 1413 aa24.41■■□□□ 1.5
RTN4-207ENST00000402434 PPEF1O14829 653 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms