RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 RBM43Q6ZSC3 357 aaKnown RBP14.87□□□□□ -0.03
FAM47DP-201ENST00000402340 THEMISQ8N1K5 641 aaPredicted RBP14.87□□□□□ -0.03
FAM47DP-201ENST00000402340 KCNF1Q9H3M0 494 aa14.87□□□□□ -0.03
FAM47DP-201ENST00000402340 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 TTC6Q86TZ1 520 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 PKNOX2Q96KN3 472 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 SLC27A2O14975 620 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 PSMA5P28066 241 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 PXDNQ92626 1479 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 RNMTO43148 476 aaKnown RBP14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 ANXA1P04083 346 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 CCDC192P0DO97 292 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 AMOTQ4VCS5 1084 aa14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.86□□□□□ -0.03
FAM47DP-201ENST00000402340 LINS1Q8NG48 757 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 PA2G4Q9UQ80 394 aaKnown RBP14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 PDCP20941 246 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 TEFQ10587 303 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 NMIQ13287 307 aaPredicted RBP14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 ANKRD1Q15327 319 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 PROSER3Q2NL68 480 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 ZNF710Q8N1W2 664 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 FAM227BQ96M60 508 aa14.85□□□□□ -0.03
FAM47DP-201ENST00000402340 KRT85P78386 507 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 PLEKHO1Q53GL0 409 aaPredicted RBP14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 AACSQ86V21 672 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 PHF8Q9UPP1 1060 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 COL9A3Q14050 684 aaPredicted RBP14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 KCNH5Q8NCM2 988 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 FAM200AQ8TCP9 573 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 SLIT3O75094 1523 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 GRM8O00222 908 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 USPL1Q5W0Q7 1092 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 LARP1BQ659C4 914 aaKnown RBP14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 NECAB1Q8N987 351 aa14.84□□□□□ -0.03
FAM47DP-201ENST00000402340 RPS6KB1P23443 525 aa14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 TOB2Q14106 344 aaPredicted RBP14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 ZNF530Q6P9A1 599 aaPredicted RBP14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 SUCLG2Q96I99 432 aa14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 MRVI1Q9Y6F6 885 aa14.83□□□□□ -0.03
FAM47DP-201ENST00000402340 CWF19L2Q2TBE0 894 aaKnown RBP14.83□□□□□ -0.04
FAM47DP-201ENST00000402340 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
FAM47DP-201ENST00000402340 C17orf53Q8N3J3 647 aaPredicted RBP14.83□□□□□ -0.04
FAM47DP-201ENST00000402340 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
FAM47DP-201ENST00000402340 VPS37CA5D8V6 355 aaPredicted RBP14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 PDIA6Q15084 440 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 SMAP1Q8IYB5 467 aaPredicted RBP14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 SCAND2PQ9GZW5 306 aaPredicted RBP14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 A0A0D9SFI3 127 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 MAP3K11Q16584 847 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 MPNDQ8N594 471 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
FAM47DP-201ENST00000402340 LIG1P18858 919 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 DNTTIP2Q5QJE6 756 aaKnown RBP14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 RNF20Q5VTR2 975 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 NUP62CLQ9H1M0 184 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 RFX7Q2KHR2 1363 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 TYRO3Q06418 890 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 DDX21Q9NR30 783 aaKnown RBP eCLIP14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 PRDM4Q9UKN5 801 aa14.81□□□□□ -0.04
FAM47DP-201ENST00000402340 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 DDX19AQ9NUU7 478 aaKnown RBP14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
FAM47DP-201ENST00000402340 TAF5LO75529 589 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 COL15A1P39059 1388 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 CTIFO43310 598 aaKnown RBP14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 PLA2G4DQ86XP0 818 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 LEO1Q8WVC0 666 aaPredicted RBP14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 CLSTN2Q9H4D0 955 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 PRAMEF22A3QJZ6 481 aa14.79□□□□□ -0.04
FAM47DP-201ENST00000402340 DTNBO60941 627 aa14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 LARP1Q6PKG0 1096 aaKnown RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 DDX54Q8TDD1 881 aaKnown RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 JARID2Q92833 1246 aaPredicted RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
FAM47DP-201ENST00000402340 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.04
FAM47DP-201ENST00000402340 CBX8Q9HC52 389 aa14.77□□□□□ -0.04
FAM47DP-201ENST00000402340 DACT1Q9NYF0 836 aa14.77□□□□□ -0.04
FAM47DP-201ENST00000402340 FAM173BQ6P4H8 233 aa14.77□□□□□ -0.04
FAM47DP-201ENST00000402340 GTF3C6Q969F1 213 aa14.77□□□□□ -0.04
FAM47DP-201ENST00000402340 KCNJ4P48050 445 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms