RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 PLBD2Q8NHP8 589 aa19.53■□□□□ 0.72
CHRFAM7A-203ENST00000401522 COL15A1P39059 1388 aa19.52■□□□□ 0.72
CHRFAM7A-203ENST00000401522 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
CHRFAM7A-203ENST00000401522 ADCY9O60503 1353 aa19.52■□□□□ 0.72
CHRFAM7A-203ENST00000401522 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ADRA2BP18089 450 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 UBR3Q6ZT12 1888 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 HMMRO75330 724 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 SSFA2P28290 1259 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 RABEP1Q15276 862 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 TRAPPC3LQ5T215 181 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 KIF6Q6ZMV9 814 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 RIC3Q7Z5B4 369 aa19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 DZIP3Q86Y13 1208 aaKnown RBP19.51■□□□□ 0.71
CHRFAM7A-203ENST00000401522 NUP188Q5SRE5 1749 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ERVV-1B6SEH8 477 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 F6X3S4 739 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 MEIS3Q99687 375 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ISY1Q9ULR0 285 aaKnown RBP19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 MAP3K15Q6ZN16 1313 aa19.5■□□□□ 0.71
CHRFAM7A-203ENST00000401522 DNAAF4Q8WXU2 420 aa19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ARHGEF1Q92888 912 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 TFCP2L1Q9NZI6 479 aa19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 CD2BP2O95400 341 aaKnown RBP19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ARXQ96QS3 562 aa19.49■□□□□ 0.71
CHRFAM7A-203ENST00000401522 SLC15A2Q16348 729 aa19.48■□□□□ 0.71
CHRFAM7A-203ENST00000401522 SKOR2Q2VWA4 1001 aaPredicted RBP19.48■□□□□ 0.71
CHRFAM7A-203ENST00000401522 C16orf71Q8IYS4 520 aaPredicted RBP19.48■□□□□ 0.71
CHRFAM7A-203ENST00000401522 GZF1Q9H116 711 aaPredicted RBP19.48■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ZBTB3Q9H5J0 574 aa19.48■□□□□ 0.71
CHRFAM7A-203ENST00000401522 RGL2O15211 777 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 METTL22Q9BUU2 404 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 STK32BQ9NY57 414 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 PHF14O94880 888 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 CAMTA2O94983 1202 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 XRCC6P12956 609 aaKnown RBP eCLIP19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 GIGYF2Q6Y7W6 1299 aaKnown RBP19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 FLAD1Q8NFF5 587 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 USP26Q9BXU7 913 aa19.47■□□□□ 0.71
CHRFAM7A-203ENST00000401522 PXDNLA1KZ92 1463 aa19.46■□□□□ 0.71
CHRFAM7A-203ENST00000401522 RFC4P35249 363 aa19.46■□□□□ 0.71
CHRFAM7A-203ENST00000401522 SLC4A10Q6U841 1118 aa19.46■□□□□ 0.71
CHRFAM7A-203ENST00000401522 ARFGEF2Q9Y6D5 1785 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 SDSP20132 328 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 MRE11P49959 708 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 HLFQ16534 295 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 BEND3Q5T5X7 828 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 OTUD7AQ8TE49 926 aaPredicted RBP19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 CLEC4GQ6UXB4 293 aa19.45■□□□□ 0.7
CHRFAM7A-203ENST00000401522 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ZPR1O75312 459 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 NEXNQ0ZGT2 675 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 TCIRG1Q13488 830 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 CLEC17AQ6ZS10 378 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 OSBPL3Q9H4L5 887 aa19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 USP42Q9H9J4 1324 aaKnown RBP19.44■□□□□ 0.7
CHRFAM7A-203ENST00000401522 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 PNPLA7Q6ZV29 1317 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 SMARCA5O60264 1052 aaPredicted RBP19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 REC8O95072 547 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 GNAI2P04899 355 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 HSP90AB3PQ58FF7 597 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 COL23A1Q86Y22 540 aaPredicted RBP19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 MYD88Q99836 296 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ZNF652Q9Y2D9 606 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 BCORQ6W2J9 1755 aa19.43■□□□□ 0.7
CHRFAM7A-203ENST00000401522 NUP98P52948 1817 aa19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 QSER1Q2KHR3 1735 aa19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 IGKV5-2P06315 115 aa19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 BCL2L12Q9HB09 334 aa19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
CHRFAM7A-203ENST00000401522 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 SCN7AQ01118 1682 aa19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ISCA1Q9BUE6 129 aa19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
CHRFAM7A-203ENST00000401522 GOLGA6L22H0YM25 854 aa19.4■□□□□ 0.7
CHRFAM7A-203ENST00000401522 APBB1O00213 710 aa19.4■□□□□ 0.7
CHRFAM7A-203ENST00000401522 GNAI3P08754 354 aa19.4■□□□□ 0.7
CHRFAM7A-203ENST00000401522 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ZNF34Q8IZ26 560 aa19.4■□□□□ 0.7
CHRFAM7A-203ENST00000401522 NEURL1BA8MQ27 555 aa19.39■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ATP5J2-PTCD1G3V325 749 aa19.39■□□□□ 0.7
CHRFAM7A-203ENST00000401522 ERC2O15083 957 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms