RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 JARID2Q92833 1246 aaPredicted RBP20.21■□□□□ 0.83
HMGA1-204ENST00000401473 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
HMGA1-204ENST00000401473 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
HMGA1-204ENST00000401473 CARMIL3Q8ND23 1372 aa20.21■□□□□ 0.83
HMGA1-204ENST00000401473 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
HMGA1-204ENST00000401473 NTSR2O95665 410 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 GCKRQ14397 625 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 RTL5Q5HYW3 569 aaPredicted RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 DZIP1LQ8IYY4 767 aaKnown RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 CWC25Q9NXE8 425 aaPredicted RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 LRP5O75197 1615 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
HMGA1-204ENST00000401473 TMEM57Q8N5G2 664 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
HMGA1-204ENST00000401473 PRR5LQ6MZQ0 368 aa20.19■□□□□ 0.82
HMGA1-204ENST00000401473 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
HMGA1-204ENST00000401473 UTP14AQ9BVJ6 771 aaKnown RBP20.19■□□□□ 0.82
HMGA1-204ENST00000401473 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
HMGA1-204ENST00000401473 PPP1R42Q7Z4L9 355 aa20.18■□□□□ 0.82
HMGA1-204ENST00000401473 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
HMGA1-204ENST00000401473 CCT4P50991 539 aaKnown RBP20.18■□□□□ 0.82
HMGA1-204ENST00000401473 FTSJ3Q8IY81 847 aaKnown RBP20.18■□□□□ 0.82
HMGA1-204ENST00000401473 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
HMGA1-204ENST00000401473 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
HMGA1-204ENST00000401473 USP44Q9H0E7 712 aa20.18■□□□□ 0.82
HMGA1-204ENST00000401473 PPP1R1BQ9UD71 204 aaPredicted RBP20.18■□□□□ 0.82
HMGA1-204ENST00000401473 ERFEQ4G0M1 354 aa20.17■□□□□ 0.82
HMGA1-204ENST00000401473 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
HMGA1-204ENST00000401473 PXDNLA1KZ92 1463 aa20.17■□□□□ 0.82
HMGA1-204ENST00000401473 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
HMGA1-204ENST00000401473 H7C1W4 665 aa20.16■□□□□ 0.82
HMGA1-204ENST00000401473 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
HMGA1-204ENST00000401473 CNBD1Q8NA66 436 aa20.16■□□□□ 0.82
HMGA1-204ENST00000401473 NBPF7P0C2Y1 421 aaPredicted RBP20.16■□□□□ 0.82
HMGA1-204ENST00000401473 NYXQ9GZU5 481 aa20.16■□□□□ 0.82
HMGA1-204ENST00000401473 PCCAP05165 728 aaPredicted RBP20.15■□□□□ 0.82
HMGA1-204ENST00000401473 CENPBP07199 599 aaPredicted RBP20.15■□□□□ 0.82
HMGA1-204ENST00000401473 CASP7P55210 303 aa20.15■□□□□ 0.82
HMGA1-204ENST00000401473 GRM8O00222 908 aa20.14■□□□□ 0.81
HMGA1-204ENST00000401473 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
HMGA1-204ENST00000401473 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
HMGA1-204ENST00000401473 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
HMGA1-204ENST00000401473 COG6Q9Y2V7 657 aa20.14■□□□□ 0.81
HMGA1-204ENST00000401473 SH3TC1Q8TE82 1336 aa20.14■□□□□ 0.81
HMGA1-204ENST00000401473 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
HMGA1-204ENST00000401473 SYT17Q9BSW7 474 aa20.13■□□□□ 0.81
HMGA1-204ENST00000401473 C9orf78Q9NZ63 289 aaPredicted RBP20.13■□□□□ 0.81
HMGA1-204ENST00000401473 ABCC12Q96J65 1359 aa20.13■□□□□ 0.81
HMGA1-204ENST00000401473 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
HMGA1-204ENST00000401473 NPHP1O15259 732 aa20.13■□□□□ 0.81
HMGA1-204ENST00000401473 SLC10A5Q5PT55 438 aa20.13■□□□□ 0.81
HMGA1-204ENST00000401473 IBTKQ9P2D0 1353 aaPredicted RBP20.13■□□□□ 0.81
HMGA1-204ENST00000401473 C10orf71Q711Q0 1435 aa20.13■□□□□ 0.81
HMGA1-204ENST00000401473 MS4A1P11836 297 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 MEIS3Q99687 375 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 CD2APQ9Y5K6 639 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 UTYO14607 1347 aa20.12■□□□□ 0.81
HMGA1-204ENST00000401473 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
HMGA1-204ENST00000401473 ZBTB7BO15156 539 aaPredicted RBP20.11■□□□□ 0.81
HMGA1-204ENST00000401473 C3orf67Q6ZVT6 689 aa20.11■□□□□ 0.81
HMGA1-204ENST00000401473 MVPQ14764 893 aaKnown RBP20.11■□□□□ 0.81
HMGA1-204ENST00000401473 KAZALD1Q96I82 304 aa20.11■□□□□ 0.81
HMGA1-204ENST00000401473 ANKRD31Q8N7Z5 1873 aa20.11■□□□□ 0.81
HMGA1-204ENST00000401473 ST5P78524 1137 aa20.1■□□□□ 0.81
HMGA1-204ENST00000401473 BRIP1Q9BX63 1249 aa20.1■□□□□ 0.81
HMGA1-204ENST00000401473 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
HMGA1-204ENST00000401473 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
HMGA1-204ENST00000401473 DDX60Q8IY21 1712 aaKnown RBP20.08■□□□□ 0.81
HMGA1-204ENST00000401473 KLRG2A4D1S0 409 aaPredicted RBP20.08■□□□□ 0.81
HMGA1-204ENST00000401473 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
HMGA1-204ENST00000401473 A0A0G2JLW4 131 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 KIF13BQ9NQT8 1826 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 KCNA3P22001 575 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 CHRNA5P30532 468 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 FOXO4P98177 505 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 NLRP3Q96P20 1036 aa20.07■□□□□ 0.8
HMGA1-204ENST00000401473 PDE8AO60658 829 aa20.06■□□□□ 0.8
HMGA1-204ENST00000401473 PLA2G12BQ9BX93 195 aa20.06■□□□□ 0.8
HMGA1-204ENST00000401473 TNRC6CQ9HCJ0 1690 aaKnown RBP20.06■□□□□ 0.8
HMGA1-204ENST00000401473 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
HMGA1-204ENST00000401473 DPEP1P16444 411 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 IRX6P78412 446 aaPredicted RBP20.05■□□□□ 0.8
HMGA1-204ENST00000401473 DDX19BQ9UMR2 479 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 TGFB2P61812 414 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 TTLL11Q8NHH1 800 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
HMGA1-204ENST00000401473 GNAI3P08754 354 aa20.04■□□□□ 0.8
HMGA1-204ENST00000401473 SRGNP10124 158 aa20.04■□□□□ 0.8
HMGA1-204ENST00000401473 PDE6BP35913 854 aa20.04■□□□□ 0.8
HMGA1-204ENST00000401473 CCDC85AQ96PX6 553 aaPredicted RBP20.04■□□□□ 0.8
HMGA1-204ENST00000401473 BICC1Q9H694 974 aaKnown RBP20.04■□□□□ 0.8
HMGA1-204ENST00000401473 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
HMGA1-204ENST00000401473 WWC3Q9ULE0 1092 aa20.04■□□□□ 0.8
HMGA1-204ENST00000401473 MYH3P11055 1940 aa20.04■□□□□ 0.8
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