RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 UBXN4Q92575 508 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 PANK2Q9BZ23 570 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 LDHCP07864 332 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 IQCEQ6IPM2 695 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 TNIP1Q15025 636 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 TMEM266Q2M3C6 531 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 CABLES1Q8TDN4 633 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 LRRC2Q9BYS8 371 aa21.07■□□□□ 0.96
COL18A1-204ENST00000400337 PA2G4Q9UQ80 394 aaKnown RBP21.07■□□□□ 0.96
COL18A1-204ENST00000400337 CCDC152Q4G0S7 254 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 FKBP15Q5T1M5 1219 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 SLC26A6Q9BXS9 759 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 NPATQ14207 1427 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 PDE4BQ07343 736 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 UBA5Q9GZZ9 404 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 CENPHQ9H3R5 247 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 RBM8AQ9Y5S9 174 aaKnown RBP21.06■□□□□ 0.96
COL18A1-204ENST00000400337 MCM5P33992 734 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 TSPYL1Q9H0U9 437 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 TEX14Q8IWB6 1497 aa21.06■□□□□ 0.96
COL18A1-204ENST00000400337 A0A1W2PP64 1363 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 BAG3O95817 575 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 ATP2B3Q16720 1220 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 TAF4BQ92750 862 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 KIAA0556O60303 1618 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 EIF3JO75822 258 aaKnown RBP21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NEFHP12036 1026 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 RFC4P35249 363 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NCKAP5LQ9HCH0 1330 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 ZSCAN12O43309 604 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 FAM193AP78312 1265 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NBPF6Q5VWK0 638 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NBPF5PQ86XG9 351 aaPredicted RBP21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NBPF4Q96M43 638 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 TSG101Q99816 390 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 VAT1LQ9HCJ6 419 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 KIF5BP33176 963 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
COL18A1-204ENST00000400337 UBE2HP62256 183 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 ACSBG1Q96GR2 724 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 EYA1Q99502 592 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 KLF18A0A0U1RQI7 1052 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 SPA17Q15506 151 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 KAT14Q9H8E8 782 aa21.04■□□□□ 0.96
COL18A1-204ENST00000400337 KIF2AO00139 706 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-204ENST00000400337 IQSEC3Q9UPP2 1182 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-204ENST00000400337 CACNA2D4Q7Z3S7 1137 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 ZSCAN22P10073 491 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-204ENST00000400337 KLHL40Q2TBA0 621 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 CPLX3Q8WVH0 158 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 CUL5Q93034 780 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 ABCC10Q5T3U5 1492 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 ZFYP08048 801 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-204ENST00000400337 LINS1Q8NG48 757 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 CEP85Q6P2H3 762 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 CCDC148Q8NFR7 591 aa21.03■□□□□ 0.96
COL18A1-204ENST00000400337 PIK3C2GO75747 1445 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 WDR62O43379 1518 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 ABCC1P33527 1531 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 ATP6V1AP38606 617 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 IL15P40933 162 aaPredicted RBP21.02■□□□□ 0.96
COL18A1-204ENST00000400337 STX1AQ16623 288 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 SPTY2D1Q68D10 685 aaPredicted RBP21.02■□□□□ 0.96
COL18A1-204ENST00000400337 EIF2AK4Q9P2K8 1649 aaKnown RBP21.02■□□□□ 0.96
COL18A1-204ENST00000400337 C8orf34Q49A92 452 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 ZNF165P49910 485 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 CWF19L2Q2TBE0 894 aaKnown RBP21.02■□□□□ 0.96
COL18A1-204ENST00000400337 MCMDC2Q4G0Z9 681 aa21.02■□□□□ 0.96
COL18A1-204ENST00000400337 ISM2Q6H9L7 571 aa21.01■□□□□ 0.95
COL18A1-204ENST00000400337 DCTPP1Q9H773 170 aa21.01■□□□□ 0.95
COL18A1-204ENST00000400337 PER1O15534 1290 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-204ENST00000400337 KIF18AQ8NI77 898 aa21.01■□□□□ 0.95
COL18A1-204ENST00000400337 ANAPC15P60006 121 aa21.01■□□□□ 0.95
COL18A1-204ENST00000400337 ANKRD18AQ8IVF6 992 aa21.01■□□□□ 0.95
COL18A1-204ENST00000400337 CCDC12Q8WUD4 166 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-204ENST00000400337 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-204ENST00000400337 ADCY5O95622 1261 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 CRNKL1Q9BZJ0 848 aaKnown RBP21■□□□□ 0.95
COL18A1-204ENST00000400337 CYP7A1P22680 504 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 TCP11L1Q9NUJ3 509 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 TRMT1Q9NXH9 659 aaKnown RBP21■□□□□ 0.95
COL18A1-204ENST00000400337 KIF5CO60282 957 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 URI1O94763 535 aaPredicted RBP21■□□□□ 0.95
COL18A1-204ENST00000400337 SSR1P43307 286 aaKnown RBP21■□□□□ 0.95
COL18A1-204ENST00000400337 WTAPQ15007 396 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 NUP88Q99567 741 aaPredicted RBP21■□□□□ 0.95
COL18A1-204ENST00000400337 ZBTB40Q9NUA8 1239 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 CCDC102AQ96A19 550 aa21■□□□□ 0.95
COL18A1-204ENST00000400337 GCP02774 474 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 ENOX2Q16206 610 aaKnown RBP20.99■□□□□ 0.95
COL18A1-204ENST00000400337 STX8Q9UNK0 236 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 MAP3K5Q99683 1374 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 PDCL2Q8N4E4 241 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 IDEP14735 1019 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
COL18A1-204ENST00000400337 KIF4BQ2VIQ3 1234 aa20.99■□□□□ 0.95
COL18A1-204ENST00000400337 GIMAP6Q6P9H5 292 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms