RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 CCDC112Q8NEF3 446 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 BOLA2Q9H3K6 86 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 ITSN1Q15811 1721 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 PLEKHG3A1L390 1219 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 CCDC144BQ3MJ40 725 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 BLOC1S2Q6QNY1 142 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 CCDC144CPQ8IYA2 1237 aa21.4■■□□□ 1.02
KDM1A-202ENST00000400181 HSP90AB4PQ58FF6 505 aa21.39■■□□□ 1.01
KDM1A-202ENST00000400181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.39■■□□□ 1.01
KDM1A-202ENST00000400181 JAK2O60674 1132 aa21.39■■□□□ 1.01
KDM1A-202ENST00000400181 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.01
KDM1A-202ENST00000400181 LGR6Q9HBX8 967 aa21.39■■□□□ 1.01
KDM1A-202ENST00000400181 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
KDM1A-202ENST00000400181 SLC27A2O14975 620 aa21.38■■□□□ 1.01
KDM1A-202ENST00000400181 NPHP1O15259 732 aa21.38■■□□□ 1.01
KDM1A-202ENST00000400181 GPATCH3Q96I76 525 aa21.38■■□□□ 1.01
KDM1A-202ENST00000400181 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
KDM1A-202ENST00000400181 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
KDM1A-202ENST00000400181 FSD1Q9BTV5 496 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 TRMT1Q9NXH9 659 aaKnown RBP21.37■■□□□ 1.01
KDM1A-202ENST00000400181 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 MAP3K5Q99683 1374 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 TTC41PQ6P2S7 1318 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 A0A0D9SFI3 127 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 FILIP1Q7Z7B0 1213 aa21.37■■□□□ 1.01
KDM1A-202ENST00000400181 SMTNL1A8MU46 457 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 PDCP20941 246 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 EDC3Q96F86 508 aaKnown RBP21.36■■□□□ 1.01
KDM1A-202ENST00000400181 TM6SF1Q9BZW5 370 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 SCAND2PQ9GZW5 306 aaPredicted RBP21.36■■□□□ 1.01
KDM1A-202ENST00000400181 KDRP35968 1356 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 USP27XA6NNY8 438 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 EVI5LQ96CN4 794 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 PGBD1Q96JS3 809 aa21.36■■□□□ 1.01
KDM1A-202ENST00000400181 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
KDM1A-202ENST00000400181 XRN1Q8IZH2 1706 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 HTATSF1O43719 755 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 ERCC4Q92889 916 aaPredicted RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 SETD1AO15047 1707 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 AKAP12Q02952 1782 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 GOLGA6L19H0YKK7 550 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 HSP90B1P14625 803 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 PSMA5P28066 241 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 FAM69CQ0P6D2 419 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 LRRC2Q9BYS8 371 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 CLSTN2Q9H4D0 955 aa21.35■■□□□ 1.01
KDM1A-202ENST00000400181 DDX19AQ9NUU7 478 aaKnown RBP21.35■■□□□ 1.01
KDM1A-202ENST00000400181 NPHP3Q7Z494 1330 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 HOXC9P31274 260 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 KLHDC4Q8TBB5 520 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 H3BQV1 296 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 KIF20AO95235 890 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 IFFO2Q5TF58 517 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 PLA2G4DQ86XP0 818 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 MAP3K2Q9Y2U5 619 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 NDUFB9Q9Y6M9 179 aa21.34■■□□□ 1.01
KDM1A-202ENST00000400181 CEP135Q66GS9 1140 aa21.33■■□□□ 1.01
KDM1A-202ENST00000400181 CTNNA3Q9UI47 895 aa21.33■■□□□ 1.01
KDM1A-202ENST00000400181 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
KDM1A-202ENST00000400181 USP16Q9Y5T5 823 aa21.33■■□□□ 1.01
KDM1A-202ENST00000400181 AIMP1Q12904 312 aaKnown RBP21.33■■□□□ 1
KDM1A-202ENST00000400181 MAP4K1Q92918 833 aa21.33■■□□□ 1
KDM1A-202ENST00000400181 EAF2Q96CJ1 260 aaPredicted RBP21.33■■□□□ 1
KDM1A-202ENST00000400181 FTOQ9C0B1 505 aaKnown RBP eCLIP21.33■■□□□ 13e-9■■□□□ 11.6
KDM1A-202ENST00000400181 OGFRQ9NZT2 677 aa21.33■■□□□ 1
KDM1A-202ENST00000400181 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
KDM1A-202ENST00000400181 EIF4A1P60842 406 aaKnown RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 ZNF589Q86UQ0 364 aaPredicted RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 BRF1Q92994 677 aa21.32■■□□□ 1
KDM1A-202ENST00000400181 NRXN3Q9Y4C0 1643 aa21.32■■□□□ 1
KDM1A-202ENST00000400181 ELP1O95163 1332 aa21.32■■□□□ 1
KDM1A-202ENST00000400181 TOB2Q14106 344 aaPredicted RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 C11orf57Q6ZUT1 292 aaPredicted RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 CGNQ9P2M7 1197 aaKnown RBP21.32■■□□□ 1
KDM1A-202ENST00000400181 FGD1P98174 961 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 PROSER3Q2NL68 480 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 FEZ1Q99689 392 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 NAP1L2Q9ULW6 460 aaPredicted RBP21.31■■□□□ 1
KDM1A-202ENST00000400181 CHGBP05060 677 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 RPS6KB1P23443 525 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 RNF20Q5VTR2 975 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 TDRD7Q8NHU6 1098 aaKnown RBP21.31■■□□□ 1
KDM1A-202ENST00000400181 SIRT1Q96EB6 747 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 RGPD1P0DJD0 1748 aa21.31■■□□□ 1
KDM1A-202ENST00000400181 G3BP1Q13283 466 aaKnown RBP eCLIP21.3■■□□□ 14e-6■■□□□ 12.5
KDM1A-202ENST00000400181 MPRIPQ6WCQ1 1025 aa21.3■■□□□ 1
KDM1A-202ENST00000400181 BECN2A8MW95 431 aa21.3■■□□□ 1
KDM1A-202ENST00000400181 CYB5RLQ6IPT4 315 aa21.3■■□□□ 1
KDM1A-202ENST00000400181 ZNF215Q9UL58 517 aaPredicted RBP21.3■■□□□ 1
KDM1A-202ENST00000400181 FAM208AQ9UK61 1670 aaKnown RBP21.3■■□□□ 1
KDM1A-202ENST00000400181 TEFQ10587 303 aa21.3■■□□□ 1
KDM1A-202ENST00000400181 ABTB2Q8N961 1025 aa21.3■■□□□ 1
KDM1A-202ENST00000400181 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
KDM1A-202ENST00000400181 SKILP12757 684 aa21.29■■□□□ 1
KDM1A-202ENST00000400181 SASH1O94885 1247 aa21.28■■□□□ 1
KDM1A-202ENST00000400181 PAXBP1Q9Y5B6 917 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms