RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 GOLGA6L9A6NEM1 432 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 STX6O43752 255 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
TNRC18-203ENST00000399537 CFAP57Q96MR6 1250 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
TNRC18-203ENST00000399537 RASAL2Q9UJF2 1139 aa16.52■□□□□ 0.24
TNRC18-203ENST00000399537 SAMM50Q9Y512 469 aa16.52■□□□□ 0.24
TNRC18-203ENST00000399537 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.23
TNRC18-203ENST00000399537 TBC1D32Q96NH3 1257 aa16.52■□□□□ 0.23
TNRC18-203ENST00000399537 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.23
TNRC18-203ENST00000399537 DDX12PQ92771 950 aa16.52■□□□□ 0.23
TNRC18-203ENST00000399537 ACTN2P35609 894 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 MYO1BO43795 1136 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 PYM1Q9BRP8 204 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 NSRP1Q9H0G5 558 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 ZNF213O14771 459 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 TRIM27P14373 513 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 KRT222Q8N1A0 295 aa16.51■□□□□ 0.23
TNRC18-203ENST00000399537 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 IFI16Q16666 785 aaKnown RBP16.51■□□□□ 0.23
TNRC18-203ENST00000399537 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
TNRC18-203ENST00000399537 GJB2P29033 226 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 TMEM67Q5HYA8 995 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 EIF2AK4Q9P2K8 1649 aaKnown RBP16.5■□□□□ 0.23
TNRC18-203ENST00000399537 CAVIN2O95810 425 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 UBE2HP62256 183 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
TNRC18-203ENST00000399537 MXRA7P84157 204 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 TIGD1Q96MW7 591 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
TNRC18-203ENST00000399537 ERMNQ8TAM6 284 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 ARL1P40616 181 aaPredicted RBP16.49■□□□□ 0.23
TNRC18-203ENST00000399537 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
TNRC18-203ENST00000399537 IQCGQ9H095 443 aaKnown RBP16.49■□□□□ 0.23
TNRC18-203ENST00000399537 MMRN2Q9H8L6 949 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 APBB1IPQ7Z5R6 666 aaPredicted RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 MICU3Q86XE3 530 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 OTUD6BQ8N6M0 293 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 CCDC172P0C7W6 258 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 IDEP14735 1019 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 TTF1Q15361 905 aaPredicted RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 ATP2C2O75185 946 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 HCLS1P14317 486 aaPredicted RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 LARP6Q9BRS8 491 aaKnown RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 HSPA4P34932 840 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 PAXBP1Q9Y5B6 917 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 CKAP4Q07065 602 aaKnown RBP16.48■□□□□ 0.23
TNRC18-203ENST00000399537 TRIM47Q96LD4 638 aa16.48■□□□□ 0.23
TNRC18-203ENST00000399537 RAB3IL1Q8TBN0 382 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 MPHOSPH6Q99547 160 aaKnown RBP16.47■□□□□ 0.23
TNRC18-203ENST00000399537 ZNF165P49910 485 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 KANK3Q6NY19 840 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 ANKS4BQ8N8V4 417 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 KIF4AO95239 1232 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 TRMT1LQ7Z2T5 733 aaKnown RBP16.47■□□□□ 0.23
TNRC18-203ENST00000399537 PDE4BQ07343 736 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 KIAA0753Q2KHM9 967 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 SLC4A8Q2Y0W8 1093 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 MFSD6Q6ZSS7 791 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
TNRC18-203ENST00000399537 METAP2P50579 478 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■□□ 17.4
TNRC18-203ENST00000399537 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
TNRC18-203ENST00000399537 GOLIM4O00461 696 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 PLVAPQ9BX97 442 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 CA8P35219 290 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
TNRC18-203ENST00000399537 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 RALGAPBQ86X10 1494 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 FBF1Q8TES7 1133 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
TNRC18-203ENST00000399537 RPGRIP1LQ68CZ1 1315 aa16.46■□□□□ 0.23
TNRC18-203ENST00000399537 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.22
TNRC18-203ENST00000399537 SLC52A1Q9NWF4 448 aa16.46■□□□□ 0.22
TNRC18-203ENST00000399537 USHBP1Q8N6Y0 703 aa16.45■□□□□ 0.22
TNRC18-203ENST00000399537 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
TNRC18-203ENST00000399537 UBA7P41226 1012 aa16.45■□□□□ 0.22
TNRC18-203ENST00000399537 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms