RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 TCEANC2Q96MN5 208 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 GOLGA1Q92805 767 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
ITSN1-209ENST00000399352 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 CCDC160A6NGH7 325 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 FAM114A1Q8IWE2 563 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 OTUD6BQ8N6M0 293 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 UBA7P41226 1012 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 GTF3C6Q969F1 213 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 TCP11L1Q9NUJ3 509 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 PRC1O43663 620 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 AFMP43652 599 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 CCDC121Q6ZUS5 278 aa18.47■□□□□ 0.55
ITSN1-209ENST00000399352 ZSCAN16Q9H4T2 348 aaPredicted RBP18.47■□□□□ 0.55
ITSN1-209ENST00000399352 ZEB2O60315 1214 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 KANK3Q6NY19 840 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 SCLT1Q96NL6 688 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 GOLIM4O00461 696 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 OPA1O60313 960 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
ITSN1-209ENST00000399352 MAP3K12Q12852 859 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 PPP1R14CQ8TAE6 165 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 BRF1Q92994 677 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 CALML4Q96GE6 196 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 NSRP1Q9H0G5 558 aaKnown RBP18.46■□□□□ 0.55
ITSN1-209ENST00000399352 SLC26A6Q9BXS9 759 aa18.46■□□□□ 0.55
ITSN1-209ENST00000399352 PUF60Q9UHX1 559 aaKnown RBP18.46■□□□□ 0.55
ITSN1-209ENST00000399352 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 CYLC1P35663 651 aaPredicted RBP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 MXRA7P84157 204 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 RRAGBQ5VZM2 374 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 LMOD1P29536 600 aaPredicted RBP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 TRMT1LQ7Z2T5 733 aaKnown RBP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 ZNF287Q9HBT7 754 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 SDSP20132 328 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 AMPD3Q01432 767 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 TNIP1Q15025 636 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 SYT10Q6XYQ8 523 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 DHX29Q7Z478 1369 aaKnown RBP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 METAP2P50579 478 aaKnown RBP eCLIP18.45■□□□□ 0.54
ITSN1-209ENST00000399352 LRRC2Q9BYS8 371 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
ITSN1-209ENST00000399352 CTAGE9A4FU28 777 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 KARSQ15046 597 aaKnown RBP18.44■□□□□ 0.54
ITSN1-209ENST00000399352 CAPZA3Q96KX2 299 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 OGFRQ9NZT2 677 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 RHOXF2BP0C7M4 288 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 U2AF2P26368 475 aaKnown RBP eCLIP18.44■□□□□ 0.542e-6■■■□□ 14.6
ITSN1-209ENST00000399352 CETN1Q12798 172 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 RHOXF2Q9BQY4 288 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 KIF4AO95239 1232 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 NBPF11Q86T75 865 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 RASSF4Q9H2L5 321 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
ITSN1-209ENST00000399352 IKBKGQ9Y6K9 419 aa18.44■□□□□ 0.54
ITSN1-209ENST00000399352 TYRO3Q06418 890 aa18.43■□□□□ 0.54
ITSN1-209ENST00000399352 RNF41Q9H4P4 317 aaPredicted RBP18.43■□□□□ 0.54
ITSN1-209ENST00000399352 MRPS27Q92552 414 aaKnown RBP18.43■□□□□ 0.54
ITSN1-209ENST00000399352 MMRN2Q9H8L6 949 aa18.43■□□□□ 0.54
ITSN1-209ENST00000399352 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
ITSN1-209ENST00000399352 ZNF444Q8N0Y2 327 aaPredicted RBP18.43■□□□□ 0.54
ITSN1-209ENST00000399352 FLIIQ13045 1269 aa18.43■□□□□ 0.54
ITSN1-209ENST00000399352 A0A087WZG4 1122 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 NUCB1Q02818 461 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 ZNF526Q8TF50 670 aaPredicted RBP18.42■□□□□ 0.54
ITSN1-209ENST00000399352 CCDC114Q96M63 670 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 SELENOSQ9BQE4 189 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 LZTFL1Q9NQ48 299 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 F13A1P00488 732 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 ANKS4BQ8N8V4 417 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
ITSN1-209ENST00000399352 IFI16Q16666 785 aaKnown RBP18.42■□□□□ 0.54
ITSN1-209ENST00000399352 FAM69CQ0P6D2 419 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 HS1BP3Q53T59 392 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 CAVIN4Q5BKX8 364 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 RRAGDQ9NQL2 400 aaPredicted RBP18.41■□□□□ 0.54
ITSN1-209ENST00000399352 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
ITSN1-209ENST00000399352 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
ITSN1-209ENST00000399352 SMAP1Q8IYB5 467 aaPredicted RBP18.41■□□□□ 0.54
ITSN1-209ENST00000399352 CTAGE1Q96RT6 745 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
ITSN1-209ENST00000399352 CRACR2BQ8N4Y2 399 aaPredicted RBP18.41■□□□□ 0.54
ITSN1-209ENST00000399352 GBP6Q6ZN66 633 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
ITSN1-209ENST00000399352 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms