RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 IFIT2P09913 472 aaKnown RBP9.01□□□□□ -0.97
RGPD1-201ENST00000398193 OTUD7AQ8TE49 926 aaPredicted RBP9.01□□□□□ -0.97
RGPD1-201ENST00000398193 KIF2CQ99661 725 aa9.01□□□□□ -0.97
RGPD1-201ENST00000398193 ANXA1P04083 346 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 A0A087WZG4 1122 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 FOXO4P98177 505 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 CYP19A1P11511 503 aaPredicted RBP9□□□□□ -0.97
RGPD1-201ENST00000398193 DDIT3P35638 169 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 DDB1Q16531 1140 aa9□□□□□ -0.97
RGPD1-201ENST00000398193 K7ELQ4 463 aaPredicted RBP8.99□□□□□ -0.97
RGPD1-201ENST00000398193 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
RGPD1-201ENST00000398193 FNBP4Q8N3X1 1017 aaPredicted RBP8.99□□□□□ -0.97
RGPD1-201ENST00000398193 CHMP5Q9NZZ3 219 aa8.99□□□□□ -0.97
RGPD1-201ENST00000398193 ST18O60284 1047 aa8.99□□□□□ -0.97
RGPD1-201ENST00000398193 KCNB2Q92953 911 aa8.99□□□□□ -0.97
RGPD1-201ENST00000398193 BCL9LQ86UU0 1499 aa8.99□□□□□ -0.97
RGPD1-201ENST00000398193 RTL9Q8NET4 1388 aa8.99□□□□□ -0.97
RGPD1-201ENST00000398193 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
RGPD1-201ENST00000398193 CWC22Q9HCG8 908 aaKnown RBP8.98□□□□□ -0.97
RGPD1-201ENST00000398193 ZNF609O15014 1411 aa8.98□□□□□ -0.97
RGPD1-201ENST00000398193 ZBTB38Q8NAP3 1195 aaPredicted RBP8.98□□□□□ -0.97
RGPD1-201ENST00000398193 MYH3P11055 1940 aa8.98□□□□□ -0.97
RGPD1-201ENST00000398193 ATP5JP18859 108 aa8.98□□□□□ -0.97
RGPD1-201ENST00000398193 LY75O60449 1722 aa8.98□□□□□ -0.97
RGPD1-201ENST00000398193 COL24A1Q17RW2 1714 aa8.98□□□□□ -0.97
RGPD1-201ENST00000398193 PTPN12Q05209 780 aaKnown RBP8.98□□□□□ -0.97
RGPD1-201ENST00000398193 GIGYF2Q6Y7W6 1299 aaKnown RBP8.98□□□□□ -0.97
RGPD1-201ENST00000398193 CSF1RP07333 972 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 AACSQ86V21 672 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 SASH1O94885 1247 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 NUP98P52948 1817 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 PALLDQ8WX93 1383 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 ATRNO75882 1429 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 SGSM2O43147 1006 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 PARP10Q53GL7 1025 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 AKAP2Q9Y2D5 859 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
RGPD1-201ENST00000398193 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.97
RGPD1-201ENST00000398193 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.97
RGPD1-201ENST00000398193 DDX60Q8IY21 1712 aaKnown RBP8.96□□□□□ -0.97
RGPD1-201ENST00000398193 TTLL7Q6ZT98 887 aa8.96□□□□□ -0.97
RGPD1-201ENST00000398193 ZNF512BQ96KM6 892 aaPredicted RBP8.96□□□□□ -0.97
RGPD1-201ENST00000398193 CCDC87Q9NVE4 849 aa8.96□□□□□ -0.97
RGPD1-201ENST00000398193 HSPA4P34932 840 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 ALDH8A1Q9H2A2 487 aaPredicted RBP8.96□□□□□ -0.98
RGPD1-201ENST00000398193 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 APBB1O00213 710 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 ZBTB22O15209 634 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 A1BGP04217 495 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 LRRFIP1Q32MZ4 808 aaKnown RBP8.96□□□□□ -0.98
RGPD1-201ENST00000398193 CLEC17AQ6ZS10 378 aa8.96□□□□□ -0.98
RGPD1-201ENST00000398193 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
RGPD1-201ENST00000398193 UBE3BQ7Z3V4 1068 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 ZNF34Q8IZ26 560 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 IL1RAPL2Q9NP60 686 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 EYA2O00167 538 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
RGPD1-201ENST00000398193 EPHA10Q5JZY3 1008 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 RILPL2Q969X0 211 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 TM6SF1Q9BZW5 370 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 DIAPH3Q9NSV4 1193 aa8.95□□□□□ -0.98
RGPD1-201ENST00000398193 KIAA1211Q6ZU35 1233 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 HAUS7Q99871 368 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 LSG1Q9H089 658 aaKnown RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 INTS4Q96HW7 963 aaKnown RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 MED23Q9ULK4 1368 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 EIF5P55010 431 aaKnown RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 MARCH10Q8NA82 808 aaPredicted RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 HMG20BQ9P0W2 317 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 DDX11L8A8MPP1 907 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 UBAP1LF5GYI3 381 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 NFKBIBQ15653 356 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 CLEC4GQ6UXB4 293 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 ATG9AQ7Z3C6 839 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 NLRP10Q86W26 655 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 PA2G4Q9UQ80 394 aaKnown RBP8.94□□□□□ -0.98
RGPD1-201ENST00000398193 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 SH3TC1Q8TE82 1336 aa8.94□□□□□ -0.98
RGPD1-201ENST00000398193 BTAF1O14981 1849 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
RGPD1-201ENST00000398193 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
RGPD1-201ENST00000398193 EAF2Q96CJ1 260 aaPredicted RBP8.93□□□□□ -0.98
RGPD1-201ENST00000398193 LMBR1LQ6UX01 489 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 PDE8AO60658 829 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 PRIM1P49642 420 aaKnown RBP8.93□□□□□ -0.98
RGPD1-201ENST00000398193 NUCB2P80303 420 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 HELLSQ9NRZ9 838 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 TFCP2Q12800 502 aa8.93□□□□□ -0.98
RGPD1-201ENST00000398193 RIC1Q4ADV7 1423 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 CCDC57Q2TAC2 916 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 CTSWP56202 376 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 RAB3GAP1Q15042 981 aa8.92□□□□□ -0.98
RGPD1-201ENST00000398193 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms